BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01782 (UTR included)
(1660 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_383_C1 1003 0.0
>BF14_383_C1
Length = 741
Score = 1003 bits (506), Expect = 0.0
Identities = 521/527 (98%)
Strand = Plus / Plus
Query: 493 agttcacaatggggcgccgaccagcgagatgttatcggtattgtaaaaacaaaccttacc 552
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 12 agttcacaatggggcgccgacnnncgagatgttatcggtattgtaaaaacaaaccttacc 71
Query: 553 caaaatctcggttctgccgtggtgtaccagatcctaagatccgtatcttcgatttgggta 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 caaaatctcggttctgccgtggtgtaccagatcctaagatccgtatcttcgatttgggta 131
Query: 613 agaagaaggctgcagtggacgacttccctctgtgcgtgcacctggtatcagacgagtatg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 agaagaaggctgcagtggacgacttccctctgtgcgtgcacctggtatcagacgagtatg 191
Query: 673 aacagctgagttccgaggccctggaggctggtcgtatctgttgtaacaagtacctcgtga 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aacagctgagttccgaggccctggaggctggtcgtatctgttgtaacaagtacctcgtga 251
Query: 733 agaactgcggcaaggatcagttccacatccgcatgaggctgcatccattccacgttatcc 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agaactgcggcaaggatcagttccacatccgcatgaggctgcatccattccacgttatcc 311
Query: 793 gcatcaacaaaatgttatcgtgtgctggagctgataggctccagacagggatgagaggtg 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gcatcaacaaaatgttatcgtgtgctggagctgataggctccagacagggatgagaggtg 371
Query: 853 cctttggtaagcctcaaggcaccgtagctcgagtacgcattggccagccaatcatgtcgg 912
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 372 cctttggtaagcctcaaggcaccgtagctcgagtacgcatcggccagccaatcatgtcgg 431
Query: 913 tgcgctccagcgacaggtggaaggcgcaagttgtagaggctctgcgtcgtgccaagttca 972
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgcgatccagcgacaggtggaaggcgcaagttgtagaggctctgcgtcgtgccaagttca 491
Query: 973 agttccctggccgtcaaaagatctacatctccaaaaaatggggtttc 1019
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 492 agttccctggccgtcaaaagatctacatctccaagaaatggggtttc 538
Score = 289 bits (146), Expect = 7e-78
Identities = 149/150 (99%)
Strand = Plus / Plus
Query: 1043 cgaacagctgcgtgaggagggccgtctagccaacgacggatgcaacgtgaagtaccgccc 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cgaacagctgcgtgaggagggccgtctagccaacgacggatgcaacgtgaagtaccgccc 621
Query: 1103 ggaacatggacccctcgactcgtggaggaaggtccagacggagatacataacgtttgaat 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ggaacatggacccctcgactcgtggaggaaggtccagacggagatacataacgtttgaat 681
Query: 1163 gtgttccccataaataaacttttaattaca 1192
||| ||||||||||||||||||||||||||
Sbjct: 682 gtgctccccataaataaacttttaattaca 711
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 247,920
Number of extensions: 6329
Number of successful extensions: 6329
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6329
Number of HSP's successfully gapped: 2
Length of query: 1660
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1643
Effective length of database: 8,119,229
Effective search space: 13339893247
Effective search space used: 13339893247
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)