BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01785 (UTR included)
(2308 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2790_C1 1824 0.0
>BF14_2790_C1
Length = 965
Score = 1824 bits (920), Expect = 0.0
Identities = 953/965 (98%)
Strand = Plus / Plus
Query: 465 tgtcaaacacattagctgtgtgttagaattgtaaaaatgaaaaacttaataattcttggc 524
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tgtcaaacatattagctgtgtgttagaattgtaaaaatgagaaacttaataattcttggc 60
Query: 525 cttttaggctatttatcgatagcttttgccgataaagaaactttagttctagtagataac 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttttaggctatttatcgatagcttttgccgataaagaaactttagttctagtagataac 120
Query: 585 ttaaatatccgagaaactcactcattattcttcaaatctttgcaagaacgcggttactcc 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaaatatccgagaaactcactcattattcttcaaatctttgcaagaacgcggttactcc 180
Query: 645 ttgactttcaagttagctgatgacgctaacctagttttatctaagtatggagaatatttg 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgactttcaagttagctgatgacgctaacctagttttatctaagtatggagaatatttg 240
Query: 705 tataaaaatttggtggtgtttgcaccgtcagtggttgagtttggtggtcagctcgatact 764
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 241 tataaaaatttggtggtgtttgcaccgtctgtggttgagtttggtggtcagctcgatact 300
Query: 765 gaagcaattaccaggttcatcgacgatggtggaaatgtgttgatagcaggaagctccgcc 824
||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 301 gaagcaattaccaggttcatcgatgatggtggaaatgtgttgatggctggaagctccgcc 360
Query: 825 gctggcgatgtgtacagagaaattgcttcggaatgcggtttcgagatggatgaagaatct 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctggcgatgtgtacagagaaattgcttcggaatgcggtttcgagatggatgaagaatct 420
Query: 885 gcagccgttattgatcatttcaactatgatagtctagatgaaggtgaccacaccagaata 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcagccgttattgatcatttcaactatgatagtctagatgaaggtgaccacaccagaata 480
Query: 945 gtagtgtcaccaaagaacctaattgatgcccccactattgtgggaactcataatacccag 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtagtgtcaccaaagaacctaattgatgcccccactattgtgggaactcataatacccag 540
Query: 1005 cccttgctgtttgacggtaccggcttgattctggacaaagacaatagcttggtattgcca 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cccttgctgtttgacggtaccggcttgattctggacaaagacaatagcttggtattgcca 600
Query: 1065 atactgacagctgacagtacagcttatagttataatcccaagaatcaggtgaaagagtac 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atactgacagctgacagtacagcttatagttataatcccaagaatcaggtgaaagagtac 660
Query: 1125 cctcatgctgtgggtcgtaaaacagtgctcatagcagcacttcaggcaaggaacaatgct 1184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 661 cctcatgctgtgggtcgtaaaacagtgctcatagcagcactgcaggcaaggaacaatgct 720
Query: 1185 cgaattgtcttcagtggatctctgttcttcttttctgatgaggctttcaattctcccgta 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cgaattgtcttcagtggatctctgttcttcttttctgatgaggctttcaattctcccgta 780
Query: 1245 tctaaagtccatggtgacaaaatcaagtccgctctgtccgggaacaaacagttgtccata 1304
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 781 tctaaagtccatggtgacaaaatcaagtctgctctgtccgggaacaaacagttgtccata 840
Query: 1305 cacctcagtcagtgggtattcggtgaacgaggccagttgcgcgtccaaagtgtacatcac 1364
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 841 cacctcagtcagtgggtattcggtgaacgnnnccagttgcgcgttcaaagtgtacatcac 900
Query: 1365 caacgtcagggtgacaaaaaatcctcgaatacttacacaatcaccgatactgtggtatac 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 caacgtcagggtgacaaaaaatcctcgaatacttacacaatcaccgatactgtggtatac 960
Query: 1425 agaat 1429
|||||
Sbjct: 961 agaat 965
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,973
Number of extensions: 19927
Number of successful extensions: 19927
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19927
Number of HSP's successfully gapped: 1
Length of query: 2308
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2291
Effective length of database: 8,119,229
Effective search space: 18601153639
Effective search space used: 18601153639
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)