BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01789 (UTR included)
(1612 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2B08 107 5e-23
BF14_736_C1 103 9e-22
BF01052B2H04 96 2e-19
BF01059A2H01 84 8e-16
BF01059B2F03 80 1e-14
BF01057B1C11 76 2e-13
BF01031B1D09 74 8e-13
BF14_2467_C1 74 8e-13
BF14_335_C5 70 1e-11
BF01016B1E06 68 5e-11
BF01011A1B08 68 5e-11
>BF01054B2B08
Length = 807
Score = 107 bits (54), Expect = 5e-23
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 986 gggaagggtgggaatagtggaatgtcaggaaagggtgcgaataggagaagggcaaccggc 1045
|||| ||||||||||| | ||| |||||||||||| ||| ||| |||||||||||||
Sbjct: 771 gggaggggtgggaataaagagatggcaggaaagggtgggaacagggaaagggcaaccggc 712
Query: 1046 tctctcactcatcggacgaaacgcagccattaaagact 1083
|||||||||||||| |||||||||||||||||||||||
Sbjct: 711 tctctcactcatcgaacgaaacgcagccattaaagact 674
>BF14_736_C1
Length = 796
Score = 103 bits (52), Expect = 9e-22
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 986 gggaagggtgggaatagtggaatgtcaggaaagggtgcgaataggagaagggcaaccggc 1045
|||| ||||||||||| | |||| |||||||||||| ||| | |||||||||||||
Sbjct: 777 gggaggggtgggaataaggaaatggcaggaaagggtgagaacgcggaaagggcaaccggc 718
Query: 1046 tctctcactcatcggacgaaacgcagccattaaagactacttca 1089
|||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 717 tctctcactcattggacgaaacgcagccactaaagactacttca 674
>BF01052B2H04
Length = 668
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 986 gggaagggtgggaatagtggaatgtcaggaaagggtgcgaataggagaagggcaaccggc 1045
|||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||
Sbjct: 281 gggaagggtgggaataagggaatgtcaggaaaaggtgggaatagggaaagggcaaccggt 340
Query: 1046 tctctcactcatcggacgaa 1065
||||| ||||||||||||||
Sbjct: 341 tctctgactcatcggacgaa 360
>BF01059A2H01
Length = 865
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 1033 aagggcaaccggctctctcactcatcggacgaaacgcagccattaaagactact 1086
||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 204 aagggcaactggctctctcactcatcggaagaatcgcagccattaaagactact 257
>BF01059B2F03
Length = 703
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 1089 agccagcccaggttcgatctgtagttacatgacaaaaactaggctctaccacctac 1144
|||||||||| |||||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 78 agccagcccatgttcgatctgtagttacatgactacagctaggctctaccacctac 133
>BF01057B1C11
Length = 848
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 1089 agccagcccaggttcgatctgtagttacatgacaaaaactaggctctaccacct 1142
|||||||||| |||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 100 agccagcccatgttcgatctgtagttacatgaccacagctaggctctaccacct 47
>BF01031B1D09
Length = 754
Score = 73.8 bits (37), Expect = 8e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 1041 ccggctctctcactcatcggacgaaacgcagccattaaagactacttca 1089
||||||||||||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 608 ccggctctctcactcgtcggacgaaacgcagccataaaaggctacttca 560
>BF14_2467_C1
Length = 1121
Score = 73.8 bits (37), Expect = 8e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 1033 aagggcaaccggctctctcactcatcggacgaaacgcagccattaaagactacttca 1089
||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 344 aagggcaaccgagcctctcactcatcggacgaaaaacagccattaaagactacttca 288
>BF14_335_C5
Length = 1597
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 833 aggtagagagaggagcctagacggcggaggtgagcatttaaagcgcgttaaaca-gggcc 891
|||||||||||||||| | ||||| |||||||||| ||||| |||||||| ||| ||||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 892 ccttaaaccta 902
|||||||||||
Sbjct: 1498 ccttaaaccta 1508
>BF01016B1E06
Length = 606
Score = 67.9 bits (34), Expect = 5e-11
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 830 gttaggtagagagaggagcctagacggcggaggtgagcatttaaagcgcgttaaacaggg 889
|||||||||||||||||| | ||||| |||||||||| ||||| ||||||| | ||||
Sbjct: 312 gttaggtagagagaggagattggacggtggaggtgagcgtttaa--cgcgttagataggg 255
Query: 890 ccccttaaaccta 902
|||||||||||||
Sbjct: 254 ccccttaaaccta 242
>BF01011A1B08
Length = 853
Score = 67.9 bits (34), Expect = 5e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1016 aagggtgcgaataggagaagggcaaccggctctctcactcatcggacgaaacgcagccat 1075
||||||| ||| ||| |||||||| ||||| ||||| ||||| |||||||||||| |||
Sbjct: 15 aagggtgggaaaagggaaagggcaaacggctttctcattcatcagacgaaacgcagtcat 74
Query: 1076 taaagactacttca 1089
||| ||||||||||
Sbjct: 75 taatgactacttca 88
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 346,613
Number of extensions: 37673
Number of successful extensions: 37673
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 37670
Number of HSP's successfully gapped: 11
Length of query: 1612
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1595
Effective length of database: 8,119,229
Effective search space: 12950170255
Effective search space used: 12950170255
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)