BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01802 (UTR included)
(3841 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2B08 92 8e-18
BF14_736_C1 88 1e-16
BF01011A1B08 72 7e-12
>BF01054B2B08
Length = 807
Score = 91.7 bits (46), Expect = 8e-18
Identities = 130/158 (82%)
Strand = Plus / Minus
Query: 2468 aaccttggttcttgaggaagacggaggggtgggaataaggagatgggaagaaaggaccgg 2527
|||||||||| || |||||| |||||||||||||||| ||||||| | |||||| ||
Sbjct: 792 aaccttggttgtttaggaagtgggaggggtgggaataaagagatggcaggaaagggtggg 733
Query: 2528 aacagggaaagggcaatcggttctctcagtcaccagtcgaaacacaaccattaaagacta 2587
|||||||||||||||| ||| ||||||| ||| | |||||| || ||||||||||||
Sbjct: 732 aacagggaaagggcaaccggctctctcactcatcgaacgaaacgcagccattaaagactg 673
Query: 2588 cttcactccaaactcctgtgagagggtggtacttcccc 2625
||| || || | || |||||||||| | |||| |||||
Sbjct: 672 ctttacgccgatcttctgtgagaggctagtacatcccc 635
>BF14_736_C1
Length = 796
Score = 87.7 bits (44), Expect = 1e-16
Identities = 113/136 (83%)
Strand = Plus / Minus
Query: 2490 ggaggggtgggaataaggagatgggaagaaaggaccggaacagggaaagggcaatcggtt 2549
||||||||||||||||||| |||| | |||||| |||| ||||||||||| ||| |
Sbjct: 776 ggaggggtgggaataaggaaatggcaggaaagggtgagaacgcggaaagggcaaccggct 717
Query: 2550 ctctcagtcaccagtcgaaacacaaccattaaagactacttcactccaaactcctgtgag 2609
|||||| ||| | |||||| || ||| ||||||||||||||| || | || |||||||
Sbjct: 716 ctctcactcattggacgaaacgcagccactaaagactacttcacgccgatcttctgtgag 657
Query: 2610 agggtggtacttcccc 2625
||||||||||||||||
Sbjct: 656 agggtggtacttcccc 641
>BF01011A1B08
Length = 853
Score = 71.9 bits (36), Expect = 7e-12
Identities = 90/108 (83%)
Strand = Plus / Plus
Query: 2526 ggaacagggaaagggcaatcggttctctcagtcaccagtcgaaacacaaccattaaagac 2585
|||| ||||||||||||| ||| | ||||| ||| ||| |||||| || |||||| |||
Sbjct: 22 ggaaaagggaaagggcaaacggctttctcattcatcagacgaaacgcagtcattaatgac 81
Query: 2586 tacttcactccaaactcctgtgagagggtggtacttcccccatcgagc 2633
|||||||| || | || |||||||||| |||||||| |||| ||||||
Sbjct: 82 tacttcacgccgatcttctgtgagaggatggtacttgccccgtcgagc 129
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 369,518
Number of extensions: 7253
Number of successful extensions: 7253
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 7252
Number of HSP's successfully gapped: 3
Length of query: 3841
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3823
Effective length of database: 8,109,745
Effective search space: 31003555135
Effective search space used: 31003555135
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)