BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01805 (UTR included)
(5614 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A2A04 898 0.0
BF01061A1F04 98 2e-19
>BF01022A2A04
Length = 678
Score = 898 bits (453), Expect = 0.0
Identities = 480/489 (98%)
Strand = Plus / Minus
Query: 1 tccttctgaagcttctggcaccggagaggtgcaatctgagttctctgagacttcgacatt 60
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 652 tccttctgaaacttctggcaccggagaggtgcaatctgagttctctgaggcttcgacatt 593
Query: 61 atcagattcaggtataatttcttctgtgtttaattcaatatccctcagtctttctaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 atcagattcaggtataatttcttctgtgtttaattcaatatccctcagtctttctaaatg 533
Query: 121 aacccctaaacttctccgatcacgaacatttattggacatgataagctgggctctgcgtc 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 aacccctaaacttctacgatcacgaacatttattggacatgataagctgggctctgcgtc 473
Query: 181 ttcattaattttgtcagtggaaagaccaatgtgagtgggagaccgtatttcttctgagga 240
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ttcattaattttatcagtagaaagaccaatgtgagtgggagaccgtatttcttctgagga 413
Query: 241 agtgtaagcattaatttccttttttgttgcagctgttagagcatttgttgctgatatggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 412 agtgtaagcattaatttccttttttgttgcagctgttagagcatttgttgctgatatagg 353
Query: 301 acatttgtaggcctggcttctattgtcaccatgcaccgaagaacttcgccaggtcggttt 360
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 352 acatttgtaggcttggcttctattgtcaccatgcaccgatgaacttcgccaggtcggttt 293
Query: 361 tgatttaatagagagtttccttggcgctggactgctaggagtagatacacaggggctgtt 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 292 tgatttaatagagagtttccttggcgccggactgctaggagtagatacacaggggctgtt 233
Query: 421 tggatcctgtgttaaaaaccttgctagagcgctcgcaagtcgcaacataagcgcatctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tggatcctgtgttaaaaaccttgctagagcgctcgcaagtcgcaacataagcgcatctgg 173
Query: 481 atattgctg 489
|||||||||
Sbjct: 172 atattgctg 164
>BF01061A1F04
Length = 362
Score = 97.6 bits (49), Expect = 2e-19
Identities = 103/121 (85%)
Strand = Plus / Minus
Query: 5490 ccaatcaataattaactttaataaatatatctttaacaattaattttaagtacttaaagt 5549
|||| ||||||||| |||||| |||||| |||||| ||||||||||||||| ||||||||
Sbjct: 333 ccaaccaataattacctttaaaaaatatttctttaccaattaattttaagtccttaaagt 274
Query: 5550 tctaagtcgtcacaacatagattatataatcttacagagatctgtcaggctgtgttcctt 5609
| ||||||| | || ||| ||||||||| |||| ||||| |||| | ||| |||| ||||
Sbjct: 273 tttaagtcgccccaccatggattatatattcttccagagttctgccgggcggtgtccctt 214
Query: 5610 g 5610
|
Sbjct: 213 g 213
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 393,400
Number of extensions: 5935
Number of successful extensions: 5935
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5935
Number of HSP's successfully gapped: 2
Length of query: 5614
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5596
Effective length of database: 8,109,745
Effective search space: 45382133020
Effective search space used: 45382133020
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)