BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01811 (UTR included)
(2689 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1H10 1457 0.0
>BF01012A1H10
Length = 858
Score = 1457 bits (735), Expect = 0.0
Identities = 771/783 (98%)
Strand = Plus / Plus
Query: 1238 tggaagcggtttcggtagttcgtccctaccacagacaactccctctgagccgacgacaga 1297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggaagcggtttcggtagttcgtccctaccacagacaactccctctgagccgacgacaga 60
Query: 1298 gaaaataccaacaacacctgccagggaaactcgtaccacaacccgttcggccatgaagct 1357
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaaataccaacaacacctgtcagggaaactcgtaccacaacccgttcggccatgaagct 120
Query: 1358 cggatctcgaggcacggatacagagagcttcgtatctcgtctcagaagcgaaggagacgt 1417
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 cggatctcgtggcacggatacagagagcttcgtgtctcgtctcagaagcgaaggagacgt 180
Query: 1418 agcagcagccccggtcaagatagagaagacggttgttacgactaataacaaggacgtaca 1477
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agcagcagccccggttaagatagagaagacggttgttacgactaataacaaggacgtaca 240
Query: 1478 tttgagatttgaggagagattgaatctggtggccggcagagatggtgatatacagagctt 1537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttgagatttgaggagagattgaatctggtggccggcagagatggtgatatacagagctt 300
Query: 1538 tgaactttctggattgctcactctgcgtatatcaaatgagcagtttggaaagatacaagt 1597
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 301 tgaactttctggattgctcactctgcgtatatcaaatgagcagtttggaaaaatacaagt 360
Query: 1598 tcatgttgacaacaaagacacgagacctcttcagctacagactcatcctaatgtggacaa 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcatgttgacaacaaagacacgagacctcttcagctacagactcatcctaatgtggacaa 420
Query: 1658 ggaacatttccgtacatcgggtgtggtccgcctgaaggcggctcagcgcgccttcccagt 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggaacatttccgtacatcgggtgtggtccgcctgaaggcggctcagcgcgccttcccagt 480
Query: 1718 caacagcgacgtcggtgtactgaagtggcgcctcgccaacactggggacacgccacaacc 1777
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caacagcgacgtcggtgtacttaagtggcgcctcgccaacactggggacacgccacaacc 540
Query: 1778 actgtcagtaaactgctggccgtcagagggcgctaacggcacttgtgacgtcaatataga 1837
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 541 actgtcagtaaactgctggccgtcagagggcgctaacggcacttgtgacgtcaacataga 600
Query: 1838 atatgaattggagcaagaacatttggcactggccgatgttaacatcaatatcccactacc 1897
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 601 atatgaattggagcaagaacatttggcactggccgatgttaacatcaacatcccactacc 660
Query: 1898 cgctggtaacactacactagtagttcaccaatgggagggaagttatacacagaagggtaa 1957
||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 661 cgctggtaacattacactagtagttcatcaatgggagggaagttatacacagaaaggtaa 720
Query: 1958 aatgttggtgtggaacattccgctcattaacaaacaacagaagtccggcacacttgagtt 2017
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 721 aatgttggtgtggaacattccgctcattaacaaacaacagaagtcgggcacacttgagtt 780
Query: 2018 tac 2020
|||
Sbjct: 781 tac 783
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 353,345
Number of extensions: 19780
Number of successful extensions: 19780
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19780
Number of HSP's successfully gapped: 1
Length of query: 2689
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2672
Effective length of database: 8,119,229
Effective search space: 21694579888
Effective search space used: 21694579888
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)