BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01813 (UTR included)
(1225 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B2F04 1118 0.0
>BF01060B2F04
Length = 768
Score = 1118 bits (564), Expect = 0.0
Identities = 579/584 (99%)
Strand = Plus / Plus
Query: 413 aggtatattttcttgaaattagtttaagatggccgttccattgctcgaccctgccaagtt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aggtatattttcttgaaattagtttaagatggccgttccattgctcgaccctgccaagtt 244
Query: 473 gcagctcgtccaggagttggagatagaaatgatgtccgatatgtacaaccgactggttag 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gcagctcgtccaggagttggagatagaaatgatgtccgatatgtacaaccgactggttag 304
Query: 533 cgcctgtcatcggaaatgcatccccgttaaataccatgaacctgaattaggtaaaggaga 592
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 305 cgcctgtcatcggaaatgcatccctgttaaataccatgaacctgaattaggtaaaggaga 364
Query: 593 gtcagtatgtcttgatcgttgcgtagccaaatatctcgatgtccatgagcgtatcgggaa 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtcagtatgtcttgatcgttgcgtagccaaatatctcgatgtccatgagcgtatcgggaa 424
Query: 653 gaagctatccaacatgtctcaaggggaggccgaggctgatttgaccaaaatcaacttaca 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gaagctatccaacatgtctcaaggggaggccgaggctgatttgaccaaaatcaacttaca 484
Query: 713 agacaagaagtagttgatatatgcaaaccatagacaacatttttgttataccaaaaaggt 772
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 485 agacaagaagtagttgatatatgcaaaccatagacaacatttttgtcataccaaaaaggt 544
Query: 773 tccattgtttttggacttttttttttcttgttttgttaaataatattaatacagtatcaa 832
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 545 tccattgtttttggacttttttttttcttgttttgttaattaatattaatacattatcaa 604
Query: 833 taaataacagctgttgtattacggaattattgtttctgttttcttaatttacagatacga 892
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 605 taaataacagctgttgtattacggaattattgtttctgttttcttaacttacagatacga 664
Query: 893 aagtttttataaaactcagtgtctaataacttgcacagagatgcatttcagtacttgttt 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aagtttttataaaactcagtgtctaataacttgcacagagatgcatttcagtacttgttt 724
Query: 953 attatagttgtatattagtttgtagaaataaaactatgaaacat 996
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 attatagttgtatattagtttgtagaaataaaactatgaaacat 768
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 214,960
Number of extensions: 5017
Number of successful extensions: 5017
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5017
Number of HSP's successfully gapped: 1
Length of query: 1225
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1208
Effective length of database: 8,119,229
Effective search space: 9808028632
Effective search space used: 9808028632
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)