BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01820 (UTR included)
(1240 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049B1B08 1520 0.0
>BF01049B1B08
Length = 785
Score = 1520 bits (767), Expect = 0.0
Identities = 779/783 (99%)
Strand = Plus / Plus
Query: 379 tttaatggatggctcattaacaatgatatcattcaaaacatgtcgtttgcagtaatcagt 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttaatggatggctcattaacaatgatatcattcaaaacatgtcgtttgcagtaatcagt 60
Query: 439 cgtgccctacatataattaattctgattctatagttttcgtatcggcgtaatcattgacg 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtgccctacatataattaattctgattctatagttttcgtatcggcgtaatcattgacg 120
Query: 499 agatgtattgtttgcaatggctgattcccgtgctgctaattccaaaacctgtgcacccgg 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatgtattgtttgcaatggctgattcccgtgctgctaattccaaaacctgtgcacccgg 180
Query: 559 cgttggtgaatacgcacgtaatgtttatggtgttgtacctgatcggatttttcttagaaa 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgttggtgaatacgcacgtaatgtttatggtgttgtacctgatcggatttttcttagaaa 240
Query: 619 ggaagccatgtacggtgtgcagtgtagtttttcttgcagcggtcatcctaatatgttata 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaagccatgtacggtgtgcagtgtagtttttcttgcagcggtcatcctaatatgttata 300
Query: 679 gtggtataggaaattgcttattttggggaagtcagtgtgaaagtgagaaatacgacacct 738
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 gtggtataggaaattgcttattttggggaagtcagtgcgaaagtgagaaatacgacacct 360
Query: 739 agtatcgtctttcggagcgcagtgtgatcaaagtgcaaagtgatttgtctctgtggagtg 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agtatcgtctttcggagcgcagtgtgatcaaagtgcaaagtgatttgtctctgtggagtg 420
Query: 799 gccaccaacaaaaatgacttgtgtatatttttgtaaatagatatgagttatttacaatgt 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccaccaacaaaaatgacttgtgtatatttttgtaaatagatatgagttatttacaatgt 480
Query: 859 aattaatgatgttgaagcgagtctgtgccgatatgtacttatgtatcccgattgttatgt 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aattaatgatgttgaagcgagtctgtgccgatatgtacttatgtatcccgattgttatgt 540
Query: 919 ttattattgaatatgtgatccgatatgtatagtaactgttaacaaataaagttattgata 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttattattgaatatgtgatccgatatgtatagtaactgttaacaaataaagttattgata 600
Query: 979 tgtgaataaaaattcaaatatacaacataatgttcattttcatttctgttaacttgtaat 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtgaataaaaattcaaatatacaacataatgttcattttcatttctgttaacttgtaat 660
Query: 1039 taattagttacaacagcaaattatataataagtagatggttttaataaaaatatgataag 1098
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 taattagttataacagcaaattatataataagtagatggttttaataaaaatatgataag 720
Query: 1099 aactttgtgataacacatagatgataataatgaggttgtaaaaggatgctatgccgtaat 1158
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 721 aactttgtgataacacatagatgataataatgaggttgtaaaaggacgctatgccataat 780
Query: 1159 cca 1161
|||
Sbjct: 781 cca 783
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 164,624
Number of extensions: 3219
Number of successful extensions: 3219
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3219
Number of HSP's successfully gapped: 1
Length of query: 1240
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1223
Effective length of database: 8,119,229
Effective search space: 9929817067
Effective search space used: 9929817067
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)