BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01823 (UTR included)
(2179 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2117_C1 1522 0.0
>BF14_2117_C1
Length = 792
Score = 1522 bits (768), Expect = 0.0
Identities = 780/784 (99%)
Strand = Plus / Plus
Query: 333 ttccacgacggttttcattttacaatacttttttcagtttttcttggtaaatcctgtgat 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 ttccacgacggttttcattttacaatacttttttcagtttttcttggtaaatcctgtgat 68
Query: 393 gatttatgtaacatcacagagtttaatagaattttttaaaagaagttgggtggatattac 452
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 69 gatttatgtaacatcacagagtttaatagaattatttaaaagaagttgggtggatattac 128
Query: 453 agagtcatatttatttgtactttaaatataagattataaaaactaaccatgccgcccaaa 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 agagtcatatttatttgtactttaaatataagattataaaaactaaccatgccgcccaaa 188
Query: 513 aaagctgctgcagccagcaaaaagactgaggcgaagaagaaggacaaagttatagaggat 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aaagctgctgcagccagcaaaaagactgaggcgaagaagaaggacaaagttatagaggat 248
Query: 573 aaaacctttggtctcaagaacaagaaaggtgccaaacaacagaaattcatccagcaagtg 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aaaacctttggtctcaagaacaagaaaggtgccaaacaacagaaattcatccagcaagtg 308
Query: 633 gaaaaacaagttaaaagtggtggcattcatccagctaagcccatggatgataagaagaag 692
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gaaaaacaagttaaaagtggcggcattcatccagctaagcccatggatgataagaagaag 368
Query: 693 gataaagaacagaaattaaaggaacagaaagaactggccatgttgttcaaaccagtgcag 752
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 369 gataaagaacagaaattaaaggaacagaaagaactggccatgttgttcaaaccggtgcag 428
Query: 753 actcaaaaagttgaaaaaggtattgatcctaagtcggtggtgtgtacattctttaagcag 812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 actcaaaaagttgaaaaaggtattgatcctaagtcggtggtgtgtacattctttaagcag 488
Query: 813 ggccagtgcacgaaaggagacaaatgtaaattctcacacgaccttagcattgaaagaaaa 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ggccagtgcacgaaaggagacaaatgtaaattctcacacgaccttagcattgaaagaaaa 548
Query: 873 gcagaaaagaggtcgctctatgtagatatgagagatgatgaagacactatggacaattgg 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gcagaaaagaggtcgctctatgtagatatgagagatgatgaagacactatggacaattgg 608
Query: 933 gacgaggataaattaaaagaagttgttgagaagaaacatggggaaggcaacaaacagaga 992
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 609 gacgaggataaattaaaagaagttgttgagaagaaacacggggaaggcaacaaacagaga 668
Query: 993 ccaggcaccgacattatttgcaagcactttttggaggctgtcgagaaatctaaatatggt 1052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ccaggcaccgacattatttgcaagcactttttggaggctgtcgagaaatctaaatatggt 728
Query: 1053 tggttctgggaatgtccgtcgggtaccaagtgtatttatagacatgccttgccgcccggc 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tggttctgggaatgtccgtcgggtaccaagtgtatttatagacatgccttgccgcccggc 788
Query: 1113 ttcg 1116
||||
Sbjct: 789 ttcg 792
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 307,360
Number of extensions: 7137
Number of successful extensions: 7137
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7133
Number of HSP's successfully gapped: 1
Length of query: 2179
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2162
Effective length of database: 8,119,229
Effective search space: 17553773098
Effective search space used: 17553773098
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)