BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01835 (UTR included)
(1843 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2197_C1 1534 0.0
>BF14_2197_C1
Length = 816
Score = 1534 bits (774), Expect = 0.0
Identities = 804/816 (98%)
Strand = Plus / Plus
Query: 484 atacaataaaaatcaaaatgaaactattttttattacgttattggttctaccggcactac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atacaataaaaatcaaaatgaaactattttttattacgttattggttctaccggcactac 60
Query: 544 tctgcttccaaagctccagcacaatatttgctagagcagatgaggatgaacttgatgatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgcttccaaagctccagcacaatatttgctagagcagatgaggatgaacttgatgatg 120
Query: 604 tagtggacattgagggtgaagacaaccaggtggtgggagacgacgctcttggtgatgacg 663
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 121 tagtggacattgagggtgaagacaaccaggtggtgggagacgacgctctcggtgatgacg 180
Query: 664 atgattcaattgttaaatcatcacaagatgttgacacaactatactgttcatgaaaccca 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgattcaattgttaaatcatcacaagatgttgacacaactatactgttcatgaaaccca 240
Query: 724 tcaccagttatggtgatgtggcattcgatcttcaagctggctaccctgttgagttcctcg 783
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaccagttacggtgatgtggcattcgatcttcaagctggctaccctgttgagttcctcg 300
Query: 784 ttggcttcattaacaagggctctgaagactacatcgttgagactatggaggcctctttcc 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttggcttcattaacaagggctctgaagactacatcgttgagactatggaggcctctttcc 360
Query: 844 gttatcccatggactacaactattacattcagaatttcacagcactaccttactacagag 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttatcccatggactacaactattacattcagaatttcacagcactaccttactacagag 420
Query: 904 aggtcaagcctaaacaagaggctacattcgcttactcattcatccccaacgaggcttatg 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aggtcaagcctaaacaagaggctacattcgcttactcattcatccccaacgaggcttatg 480
Query: 964 ccggacgtccattcggacttaacattcagctcaactatagagacgccagcggaaactact 1023
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 ccggacgtccattcggacttaacattcaactcaactatagagacgccagcggaaactact 540
Query: 1024 atcaggaagccgtatacaaccagacaatcaacattgtcgaagtatccgaaggacttgatg 1083
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 541 atcaggaagccgtatacaaccagacaatcaacattgtcgaagtatcagaaggactcgatg 600
Query: 1084 gagagacatttttcttgtatgtcttccttggtgcagcctgtgtgttgactttagttcttg 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gagagacatttttcttgtatgtcttccttggtgcagcctgtgtgttgactttagttcttg 660
Query: 1144 gacaacaagcattatcttcactcgcaagaagatcaaggtccccacgatccgtgtctaagc 1203
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 661 gacaacaagcattatcttcactcgcaagaagatcaagatccccacgatccgtgtctaagc 720
Query: 1204 ccattgagaccggaactgccactaatgtcgactatgactggttgccaaaggatgtggcta 1263
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 721 ccattgagaccggaactgccactaatgtcgactatgactggttgccaannnatgtggcnn 780
Query: 1264 accaacttaaaaaatcacccaaaacccccaaacagt 1299
|||||||||||||||||||||||||||||||||||
Sbjct: 781 nccaacttaaaaaatcacccaaaacccccaaacagt 816
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 245,920
Number of extensions: 5050
Number of successful extensions: 5050
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5050
Number of HSP's successfully gapped: 1
Length of query: 1843
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1826
Effective length of database: 8,119,229
Effective search space: 14825712154
Effective search space used: 14825712154
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)