BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01846 (UTR included)
(1852 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028A2D09 791 0.0
BF14_335_C4 125 3e-28
BF01043B1E03 109 2e-23
BF01016B1E06 103 1e-21
BF14_335_C5 101 4e-21
BF14_335_C2 98 6e-20
BF01049B1F01 94 9e-19
BF01021A2B11 86 2e-16
BF01019A1H08 82 4e-15
BF01017A1F03 68 5e-11
>BF01028A2D09
Length = 550
Score = 791 bits (399), Expect = 0.0
Identities = 439/450 (97%), Gaps = 3/450 (0%)
Strand = Plus / Plus
Query: 526 ctatggcaacagtacaaaacctagaaactaaatgtagaacactccgctctgacagtatga 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 ctatggcaacagtacaaaacctagaaactaaatgtagaacactccgctctgacagtatga 160
Query: 586 acaatgagatatcatcgacatccagcgaggagggatcctcggatcctattgtgaagttca 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 acaatgagatatcatcgacatccagcgaggagggatcctcggatcctattgtgaagttca 220
Query: 646 acaacttctacaagagcagttacaaggaatccgcatccgacaacgagataatcgtatcaa 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 acaacttctacaagagcagttacaaggaatccgcatccgacaacgagataatcgtatcaa 280
Query: 706 agccaatccagaggaat-tgttacaagtccctcggg-aacatagcgg-attataatgaaa 762
|||| |||||||||||| |||||||||||||||| |||||||| |||| |||||||
Sbjct: 281 agccgatccagaggaatgtgttacaagtccctcgnnnaacatagcnnnattacaatgaaa 340
Query: 763 taaatcacaataccatacagaacagcatcagtaatatagatgtcagcctgcacagcagcg 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 taaatcacaataccatacagaacagcatcagtaatatagatgtcagcctgcacagcagcg 400
Query: 823 agataaagaagttcgagtctctaaggatacctatagtaggctatgaggtgatggaggaac 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 agataaagaagttcgagtctctaaggatacctatagtaggctatgaggtgatggaggaac 460
Query: 883 gagctaggttcacgatatacaagctgaaggtggaggatgataagcgggaccagtcctggc 942
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 461 gagctagnttcacgatatacaagctgaaggtggaggatgataagcgggaccaatcctggc 520
Query: 943 tggtctttaggagatacacggactttgtta 972
||||||||||||||||||||||||||||||
Sbjct: 521 tggtctttaggagatacacggactttgtta 550
>BF14_335_C4
Length = 1491
Score = 125 bits (63), Expect = 3e-28
Identities = 105/119 (88%)
Strand = Plus / Plus
Query: 221 tcgattcatatttggttaggtacagcgaggaggttggacggtggaggtgagcgtttaacg 280
|||||||||||||||||||||| || |||||| ||||| || ||||||||||||||| |
Sbjct: 1173 tcgattcatatttggttaggtagagagaggagcttggaaagttgaggtgagcgtttaatg 1232
Query: 281 cgcgttagataggggcctcttaaatctacacttgggttgcaagtcccaggcactgttga 339
||||| ||||| |||| |||||| |||||| ||||| |||||||||||||||||||||
Sbjct: 1233 cgcgtaagataaaggccccttaaacctacacctgggtcgcaagtcccaggcactgttga 1291
>BF01043B1E03
Length = 830
Score = 109 bits (55), Expect = 2e-23
Identities = 103/119 (86%)
Strand = Plus / Plus
Query: 216 taggttcgattcatatttggttaggtacagcgaggaggttggacggtggaggtgagcgtt 275
|||||| | |||| ||||||||||||| || ||||| |||||| |||||||||||| |
Sbjct: 312 taggtttgtttcaaatttggttaggtagagagaggaccttggacagtggaggtgagcact 371
Query: 276 taacgcgcgttagataggggcctcttaaatctacacttgggttgcaagtcccaggcact 334
|||||||||||||||||||||| ||||| ||| || |||||||||||||||| |||||
Sbjct: 372 taacgcgcgttagataggggccctttaaacctatacctgggttgcaagtcccaagcact 430
>BF01016B1E06
Length = 606
Score = 103 bits (52), Expect = 1e-21
Identities = 101/115 (87%), Gaps = 3/115 (2%)
Strand = Plus / Minus
Query: 225 ttcatatttggttaggtacagcgaggaggttggacggtggaggtgagcgtttaacgcgcg 284
|||| ||||||||||||| || |||||| ||||||||||||||||||||||||| ||||
Sbjct: 322 ttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaa--cgcg 265
Query: 285 ttagataggggcctcttaaatctacacttgggttgcaagtcccaggcactgttga 339
||||||| ||||| |||||| |||||| ||||| || | |||| |||||||||||
Sbjct: 264 ttagata-gggccccttaaacctacacctgggtcgctactccccggcactgttga 211
>BF14_335_C5
Length = 1597
Score = 101 bits (51), Expect = 4e-21
Identities = 88/102 (86%)
Strand = Plus / Plus
Query: 238 aggtacagcgaggaggttggacggtggaggtgagcgtttaacgcgcgttagataggggcc 297
||||| || |||||| ||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 298 tcttaaatctacacttgggttgcaagtcccaggcactgttga 339
|||||| |||||| | |||||||||||||||||||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttga 1539
>BF14_335_C2
Length = 1827
Score = 97.6 bits (49), Expect = 6e-20
Identities = 124/146 (84%), Gaps = 6/146 (4%)
Strand = Plus / Minus
Query: 215 gtaggttcgattcatatttggttaggtacagcgaggaggttggacggtggaggtgagcgt 274
||||||||| |||| ||||||||||| || |||||| |||||||||||||||||||||
Sbjct: 1004 gtaggttcgtttcaaatttggttagg---agagaggagcttggacggtggaggtgagcgt 948
Query: 275 tta--acgcgcgttagataggggcctcttaaatctacacttgggttgcaagtcccaggca 332
| ||||| ||||||||||||| ||||||| |||||| || || |||| |||||||||
Sbjct: 947 tatgtacgcgagttagataggggc-tcttaaacctacacctgtgtcgcaaatcccaggca 889
Query: 333 ctgttgaggctgccctccccgcaacg 358
||||||| ||| | ||||| ||||||
Sbjct: 888 ctgttgaagctcctctccctgcaacg 863
>BF01049B1F01
Length = 840
Score = 93.7 bits (47), Expect = 9e-19
Identities = 105/123 (85%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 236 ttaggtacagcgaggaggttggacggtggaggtgagcgtttaacgcgcgttagatagggg 295
||||||| || |||||| ||||||||| |||||| | |||||||| | |||||||||||
Sbjct: 708 ttaggtagagagaggagcttggacggtagaggtgggtgtttaacgggagttagatagggc 649
Query: 296 cctcttaaatctacacttgggttgcaagtcccaggcactgttgaggctgccctccccgca 355
|| |||| | |||||| ||||| ||||||||||||||||||||| ||| | ||||| |||
Sbjct: 648 cc-cttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
Query: 356 acg 358
|||
Sbjct: 589 acg 587
>BF01021A2B11
Length = 729
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 247 gaggaggttggacggtggaggtgagcgtttaacgcgcgttagataggggcctcttaaatc 306
|||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||| || |
Sbjct: 376 gaggagcttggacggtggaggtgagcgtttaacgcgtgttagatcggggcgccttcaacc 435
Query: 307 tacacttgggttgcaagtcccaggcac 333
||||| ||||| | ||||||||||||
Sbjct: 436 tacacctgggtgcccagtcccaggcac 462
>BF01019A1H08
Length = 504
Score = 81.8 bits (41), Expect = 4e-15
Identities = 86/101 (85%)
Strand = Plus / Minus
Query: 273 gtttaacgcgcgttagataggggcctcttaaatctacacttgggttgcaagtcccaggca 332
|||||||||| ||||||||| ||| |||||| |||||| ||||| |||| |||||||||
Sbjct: 504 gtttaacgcgtcttagataggagccccttaaacctacacctgggtcgcaactcccaggca 445
Query: 333 ctgttgaggctgccctccccgcaacggaatggacctggcac 373
||||||| ||| | ||||| |||||| ||||||| |||||
Sbjct: 444 ctgttgaagctcctctccctgcaacgcgatggacccggcac 404
>BF01017A1F03
Length = 782
Score = 67.9 bits (34), Expect = 5e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 232 ttggttaggtacagcgaggaggttggacggtggaggtgagcgtttaacgcgcgttagata 291
|||||||| || || |||||| || |||||||||||||||||||||||||| |||||||
Sbjct: 199 ttggttagatagagagaggagcttccacggtggaggtgagcgtttaacgcgcattagata 258
Query: 292 gg 293
||
Sbjct: 259 gg 260
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,694
Number of extensions: 5634
Number of successful extensions: 5634
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 5626
Number of HSP's successfully gapped: 10
Length of query: 1852
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1835
Effective length of database: 8,119,229
Effective search space: 14898785215
Effective search space used: 14898785215
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)