BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01854 (UTR included)
(1849 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1641_C1 2603 0.0
>BF14_1641_C1
Length = 1725
Score = 2603 bits (1313), Expect = 0.0
Identities = 1376/1394 (98%), Gaps = 5/1394 (0%)
Strand = Plus / Plus
Query: 461 ttgttttgagttctttgtggtgatccaatttaatgctaaaatgaatcgcactgaggggct 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttgttttgagttctttgtggtgatccaatttaatgctaaaatgaatcgcactgaggggct 61
Query: 521 ggtacaacgaaggaatgtagtgaaagaaaatgatggcaacagggaaaatcatgatattga 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggtacaacgaaggaatgtagtgaaagaaaatgatggcaacagggaaaatcatgatattga 121
Query: 581 cgataagaaaaatgataaaaattatgatgacggcgattcaaaggaaactcgtttaactct 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgataagaaaaatgataaaaattatgatgacggcgattcaaaggaaactcgtttaactct 181
Query: 641 gatggaagaagttttattattaggattaaaagacaaagagggttacacatccttttggaa 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gatggaagaagttttattattaggattaaaagacaaagagggttacacatccttttggaa 241
Query: 701 tgattgtatatctagcggtttacggggctgcatcttgattgaactgggattgcgaggtcg 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgattgtatatctagcggtttacggggctgcatcttgattgaactgggattgcgaggtcg 301
Query: 761 cgtcgaattagaaagagctggtatgagaaggaaaggcttgttatccagaaaagttatagt 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgtcgaattagaaagagctggtatgagaaggaaaggcttgttatccagaaaagttatagt 361
Query: 821 taaatcagattctccgactggtgatgtgttgcttgatgaagctttgaaacacatgaaaga 880
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaaatcagattctccgactggtgatgtgttgcttgatgaagctttgaaacacatgaaaga 421
Query: 881 cactgatccaccagaaacagtgcagagctggatagaatatctcagtggtgaaacatggaa 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cactgatccaccagaaacagtgcagagctggatagaatatctcagtggtgaaacatggaa 481
Query: 941 tcccatgaagctgaaatatcaattaaagaatgtacgtgagaggctagcaaagaatcttgt 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcccatgaagctgaaatatcaattaaagaatgtacgtgagaggctagcaaagaatcttgt 541
Query: 1001 tgagaaaggtgtccttaccacagagaaacaaaacttcctactctttgatatgacgaccca 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgagaaaggtgtccttaccacagagaaacaaaacttcctactctttgatatgacgaccca 601
Query: 1061 tccattgactgacaatgtggttaaatgcagattagtaaagaaggtcctcc---cagctct 1117
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 602 tccattgactgacaatgtggttaaatgcagattagtaaagaaggtccaggaggcagctct 661
Query: 1118 gcgccgttccataatcgacgtggctcatgctgataagaggtcattggcacttttgatgtt 1177
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 662 gcgccgttccataatcgacgtggctcatgctgataagaggtctttggcacttttgatgtt 721
Query: 1178 ggcccattccgctgatgttctagagaacgcttttgccccactatctgatgaagactacga 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ggcccattccgctgatgttctagagaacgcttttgccccactatctgatgaagactacga 781
Query: 1238 actggccacaagacgagtcagagcgctcctcgatctagactttgaggctgaagccatgag 1297
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 782 actggccacaagacgagtcagagcgctcctcgatctagacttcgaggctgaagccatgag 841
Query: 1298 acctgaatcctgtgaaatcatgtgggctgtgttcgctgccttcactaaatagcacagtct 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 acctgaatcctgtgaaatcatgtgggctgtgttcgctgccttcactaaatagcacagtct 901
Query: 1358 ctaaagccacagggattaatcataccagtggcaaatctgtcgtgcgatgaacagtatgct 1417
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 902 ctaaagccacagggattaatcataccagtggcaaatctgtcgtgtgatgaacagtatgct 961
Query: 1418 atatcattatttttgtgatcagtattgatacattttgacaagacaaaatttttatgaccc 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 atatcattatttttgtgatcagtattgatacattttgacaagacaaaatttttatgaccc 1021
Query: 1478 cg-cttttagaacggcacaaaaatcgttcaggaatttcttagagattatattgtatggtg 1536
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 cgncttttagaacggcacaaaaatcgttcaggaatttcttagagattatattgtatggtg 1081
Query: 1537 ttgccaattcacaaacaagtttataatttgatgcatgtaaaattgtaaattaacgccaat 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ttgccaattcacaaacaagtttataatttgatgcatgtaaaattgtaaattaacgccaat 1141
Query: 1597 atgttcttataagtctcctaatgagtgtgtagtgtaattctagaaatttattaaatccat 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 atgttcttataagtctcctaatgagtgtgtagtgtaattctagaaatttattaaatccat 1201
Query: 1657 gttattggtgtattactagatttaaaaaaaa-ttaaaatggtatatatatttaacaaggc 1715
|||||||||||||||||| | || ||||| ||||||||||||||||||||||||||||
Sbjct: 1202 gttattggtgtattactaaaaaaaanaaaaatttaaaatggtatatatatttaacaaggc 1261
Query: 1716 atttgtcaaatgatactaaatgtatatctgtatgtaaaacctgtatataacatacaatta 1775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 atttgtcaaatgatactaaatgtatatctgtatgtaaaacctgtatataacatacaatta 1321
Query: 1776 tctcagtccttaactgacagataacatgaggtggttttaaaaatagatgtttggaacata 1835
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 tctcagtccttaactcacagataacatgaggtggttttaaaaatagatgtttggaacata 1381
Query: 1836 attcgaatataata 1849
||||||||||||||
Sbjct: 1382 attcgaatataata 1395
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 254,385
Number of extensions: 5390
Number of successful extensions: 5390
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5388
Number of HSP's successfully gapped: 2
Length of query: 1849
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1832
Effective length of database: 8,119,229
Effective search space: 14874427528
Effective search space used: 14874427528
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)