BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01856 (UTR included)
(2980 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B2A08 1350 0.0
>BF01028B2A08
Length = 715
Score = 1350 bits (681), Expect = 0.0
Identities = 699/705 (99%)
Strand = Plus / Plus
Query: 419 aattcaaattcaattaaaaccaaaataatttatagaatgtgaataaaatttccatataat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 aattcaaattcaattaaaaccaaaataatttatagaatgtgaataaaatttccatataat 70
Query: 479 aacaatatatcgatttaaaaacatggcagctaataatctcccatatgaggtcctagttta 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 aacaatatatcgatttaaaaacatggcagctaataatctcccatatgaggtcctagttta 130
Query: 539 tctttttaaatatttaccaaattctgatagaaaggcggctagcgaaacttgtcaatcttg 598
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 131 tctttttaaatatttacctaattctgacagaaaggcggctagcgaaacttgtcaatcttg 190
Query: 599 gtatctcgccgctaatgactactactttttaaaaaacaaaactcttgtattttatagaac 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gtatctcgccgctaatgactactactttttaaaaaacaaaactcttgtattttatagaac 250
Query: 659 agacttgctaaaagaggcttcaccactgcaagtaattgaaaatacaataataccatatta 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agacttgctaaaagaggcttcaccactgcaagtaattgaaaatacaataataccatatta 310
Query: 719 caattttatattcaatgaggtagaactgtcccaaaagacaaattatttttgggaaaaaat 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caattttatattcaatgaggtagaactgtcccaaaagacaaattatttttgggaaaaaat 370
Query: 779 tggagaaaacataagaagtttgacaataagaaaatgtgatattcatgaaaaaactattga 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tggagaaaacataagaagtttgacaataagaaaatgtgatattcatgaaaaaactattga 430
Query: 839 ttatattttagagaaatgcacaagcatagaaacattgaacatacaatgctgcaaggaact 898
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 431 ttatattttagagaaatgcacaagcttagaaacattgaacatacaatgctgcaaggaact 490
Query: 899 ctttatgtccggatgtctattggagaagacaaacggtgtgatagccaatagttttaagaa 958
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 491 ctttatgtccggatgtctattggagaagacaaacggtgtgatagctaatagttttaagaa 550
Query: 959 cttgaaaaatctaaacttgtctgaaaacaaatatataactgatgcattattctataggtt 1018
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 551 cttgaaaaatctaaacttgtctgaaaacaaatatataaccgatgcattattctataggtt 610
Query: 1019 tgtcaaatctgcaccagaactagaacatctatgtctgtcattgtccccaatacaattcca 1078
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 611 tgtcaaatctgcaccagaactagaacatctatgtctatcattgtccccaatacaattcca 670
Query: 1079 tgctggatttgttaagaaattttactcgcagactactaatatatt 1123
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tgctggatttgttaagaaattttactcgcagactactaatatatt 715
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 501,190
Number of extensions: 10876
Number of successful extensions: 10876
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10876
Number of HSP's successfully gapped: 1
Length of query: 2980
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2962
Effective length of database: 8,109,745
Effective search space: 24021064690
Effective search space used: 24021064690
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)