BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01859 (UTR included)
(2269 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057A2E08 1417 0.0
BF01056B2A03 321 3e-87
>BF01057A2E08
Length = 735
Score = 1417 bits (715), Expect = 0.0
Identities = 730/735 (99%)
Strand = Plus / Plus
Query: 1140 aatataccagaaaacagtgaagaggaacatcatgaaaggctgtcaaacgaagaagacgtc 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatataccagaaaacagtgaagaggaacatcatgaaaggctgtcaaacgaagaagacgtc 60
Query: 1200 tcctcgaaatcctcctgctccgatgacaggagaccgcctcaaagaccgccgcccgtcctg 1259
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 tcctcgaaatcctcctgctccgatgacaggagaccgcctcagagaccgccgcccgtcctg 120
Query: 1260 cgtcaaaaatcacacagacatccgaaaagggaactccgggagaggaaatatgttaagaaa 1319
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtcaaaagtcacacagacatccgaaaagggaactccgggagaggaaatatgttaagaaa 180
Query: 1320 agatccggcagcctacaacgccgggaattactggaaattatacaagctaacatggaaaag 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatccggcagcctacaacgccgggaattactggaaattatacaagctaacatggaaaag 240
Query: 1380 aatcatctgagctttcaaacgtctagaaagcccagcgaggtcatagttaacgaagaagat 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatcatctgagctttcaaacgtctagaaagcccagcgaggtcatagttaacgaagaagat 300
Query: 1440 atagcaaataaataccagaagcttcggaacagagcatacacagtgactgaaaaaccagtt 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atagcaaataaataccagaagcttcggaacagagcatacacagtgactgaaaaaccagtt 360
Query: 1500 aatgtgatgaaaaggtccaaacaggagtctccgagtcacggatatctggacctggcttgt 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatgtgatgaaaaggtccaaacaggagtctccgagtcacggatatctggacctggcttgt 420
Query: 1560 ggcggggactcaaacttatgtagatacgataggtacttacacgctgtgatatgttcctca 1619
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggaggggactcaaacttatgtagatacgataggtacttacacgctgtgatatgttcctca 480
Query: 1620 gcgcgtcacgctcacactggttaccatcagaagcaaacgcaatcatccaaacataaaaca 1679
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 481 gcgcgtcacgctcacactggttaccatcagaaacaaacgcaatcatccaaacataaaaca 540
Query: 1680 tcccacaaccctaactcaagatcgaggtcccatgaccaccatcaaccacactccacccaa 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcccacaaccctaactcaagatcgaggtcccatgaccaccatcaaccacactccacccaa 600
Query: 1740 cccagagtattgcagataatattcttatagaaattaaatttgggcatggtcaaacacaac 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cccagagtattgcagataatattcttatagaaattaaatttgggcatggtcaaacacaac 660
Query: 1800 tatgtccttaaaataaaaaaaaatattaaattcgttaccaaggctgtattgaacaaattt 1859
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 661 tatgtccttaaaataaaaaaaaatattaaatttgttaccaaggctgtattgaacaaattt 720
Query: 1860 aaagaacataatacc 1874
|||||||||||||||
Sbjct: 721 aaagaacataatacc 735
>BF01056B2A03
Length = 664
Score = 321 bits (162), Expect = 3e-87
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 2108 tcttaatttgaataattatagtgccttagcacttgaatgaaatgtgtagtaaattgattt 2167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttaatttgaataattatagtgccttagcacttgaatgaaatgtgtagtaaattgattt 60
Query: 2168 taatcgagtgtaagggatgaattgtgtattacttcaatgctcattagggtaatgtagaca 2227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taatcgagtgtaagggatgaattgtgtattacttcaatgctcattagggtaatgtagaca 120
Query: 2228 tataaaaactcattttagagttgcagactgatcttagattaa 2269
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tataaaaactcattttagagttgcagactgatcttagattaa 162
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 260,560
Number of extensions: 5599
Number of successful extensions: 5599
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5599
Number of HSP's successfully gapped: 2
Length of query: 2269
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2252
Effective length of database: 8,119,229
Effective search space: 18284503708
Effective search space used: 18284503708
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)