BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01861 (UTR included)
(4018 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01044A2B11 1382 0.0
BF01019A2F05 926 0.0
>BF01044A2B11
Length = 767
Score = 1382 bits (697), Expect = 0.0
Identities = 734/748 (98%)
Strand = Plus / Plus
Query: 1699 attctatcgcaagtaaaggactgcttaggcccaatggaggagtggacatagttattagaa 1758
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attctatagcaagtaaaggactgcttaggcccaatggaggagtggacatagttattagaa 60
Query: 1759 caatttctattcttatggctatattacctttttatttgatatacgctcaaaacttaccaa 1818
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 61 caatttctattcttatggctatattagccttttatttgatatacgctcaaaacttaccaa 120
Query: 1819 tgcagtattatatttactttgtgatgccaatagttatgtggatgtatgctgtgacaccag 1878
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcagtattatatttactttttgatgccaatagttatgtggatgtatgctgtgacaccag 180
Query: 1879 tcaaattatggatggttactttaaaatctattagaaataaaaaaacgctgttgatcttat 1938
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 181 tcaaattatggatggttactttaaaatctattagaaataataaaacgctattgatgttat 240
Query: 1939 ggtttgaaatagtatgttatactttgggatcacttgctatggggtttgcttttagtcaga 1998
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 ggtttgaaatagtatgttatactttgggatcacttgctttggggtttgcttttagtcaga 300
Query: 1999 gatgggtgttgagcatccctctactaggtatgagcttgtggccatttttatcatcaaaac 2058
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 301 gatgggtgttgagcatccctctactaggtatgagcttgtggccatttttttcatcaaaac 360
Query: 2059 aaaactcaagatccacttacattgcatgggttgctggatgtataatgctaagtgtttttt 2118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaactcaagatccacttacattgcatgggttgctggatgtataatgctaagtgtttttt 420
Query: 2119 cattcctgccagtagttggtaaagatgtgtgtattgaattagtaattcttgcaggtttaa 2178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cattcctgccagtagttggtaaagatgtgtgtattgaattagtaattcttgcaggtttaa 480
Query: 2179 tttggataatagcggtgagtttctatgtatggaacacattgatgccatactacgacaaaa 2238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttggataatagcggtgagtttctatgtatggaacacattgatgccatactacgacaaaa 540
Query: 2239 ataacgaaattaaacgggaggcgattatgagtatcatacaaataacaatcttagcaatat 2298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ataacgaaattaaacgggaggcgattatgagtatcatacaaataacaatcttagcaatat 600
Query: 2299 cattggtaatcatctttttgcagtcgaaaaggtttatagacgaaatgccaatatcaaggg 2358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cattggtaatcatctttttgcagtcgaaaaggtttatagacgaaatgccaatatcaaggg 660
Query: 2359 tctttcaaatattatgttggaatttttctgttatgttccctctactgccactgttctata 2418
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tctttcnnntattatgttggaatttttctgttatgttccctctactgccactgttctata 720
Query: 2419 caaagaaatgtataaatagacttcttgg 2446
||||||||||||| | ||||||||||||
Sbjct: 721 caaagaaatgtatnantagacttcttgg 748
>BF01019A2F05
Length = 712
Score = 926 bits (467), Expect = 0.0
Identities = 473/475 (99%)
Strand = Plus / Plus
Query: 2805 ggtttgttcttaagacacatgtcgaaatcaaatgatattgcctgtactatcaacgtggac 2864
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 238 ggtttgttcttaagacacatgtcgaaatcaaatgatattgcctgtactatcaatgtggac 297
Query: 2865 aaacaaagtgaggattatgcgggtgacaaattaataagtccttcagcttccagaaatcaa 2924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aaacaaagtgaggattatgcgggtgacaaattaataagtccttcagcttccagaaatcaa 357
Query: 2925 gaacccattttacaggttttgaaaagatttctaatatgtgatatcgaccaagttgaagat 2984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gaacccattttacaggttttgaaaagatttctaatatgtgatatcgaccaagttgaagat 417
Query: 2985 gaaagccctttattcttagaaatttcttcaggtacaggtcaacacctagcatattttgca 3044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gaaagccctttattcttagaaatttcttcaggtacaggtcaacacctagcatattttgca 477
Query: 3045 cctcattttcctggagtaaaattccaaccatcggaatgtgatgttaaggtaatgaaaagc 3104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cctcattttcctggagtaaaattccaaccatcggaatgtgatgttaaggtaatgaaaagc 537
Query: 3105 atatcatattatgcgaataactgtccaacaaagaatatttttcaacctttgctgattgac 3164
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 538 atatcatattatgcgaataactgcccaacaaagaatatttttcaacctttgctgattgac 597
Query: 3165 atacaaaacaagttaagtaattatggatttgaggaggattcaattgactatatgttcaat 3224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 atacaaaacaagttaagtaattatggatttgaggaggattcaattgactatatgttcaat 657
Query: 3225 gccaatatgattcacataagtccttttgaatgcactattggcttatttgaaaatg 3279
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gccaatatgattcacataagtccttttgaatgcactattggcttatttgaaaatg 712
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 558,617
Number of extensions: 12238
Number of successful extensions: 12238
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 12238
Number of HSP's successfully gapped: 2
Length of query: 4018
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4000
Effective length of database: 8,109,745
Effective search space: 32438980000
Effective search space used: 32438980000
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)