BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01867 (UTR included)
(2101 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056B2A03 918 0.0
>BF01056B2A03
Length = 664
Score = 918 bits (463), Expect = 0.0
Identities = 482/486 (99%), Gaps = 3/486 (0%)
Strand = Plus / Minus
Query: 1617 ttttcttactaaccacaaggattatatttgataataaatattttttgacaagatcaagct 1676
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tttttttactaaccacaaggattatatttgataataaatattttttgacaagatcaagct 582
Query: 1677 tttactgcatgtactgtacaatttaaaatggaacaacagcaaaaaaaaaattaaaagtaa 1736
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 581 tttactgcatgtactgtacaatttaaaatggaacaacagcaaaaaaaa--ttaaaagtaa 524
Query: 1737 caaaacagttgaagttttaaaacaatacaatctatttgtacaaagttaaccacattcagt 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 caaaacagttgaagttttaaaacaatacaatctatttgtacaaagttaaccacattcagt 464
Query: 1797 tacacttgacattcacacttacatcaataacataccgagtgaaatattgtcatgaaccag 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tacacttgacattcacacttacatcaataacataccgagtgaaatattgtcatgaaccag 404
Query: 1857 aatcactctatcacaagtaatactaacataattttaggattaagctgttacaataaatac 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aatcactctatcacaagtaatactaacataattttaggattaagctgttacaataaatac 344
Query: 1917 ttaagttacaactagtaaagtaaaaattaagaggtagataaaacatttagagattcattc 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttaagttacaactagtaaagtaaaaattaagaggtagataaaacatttagagattcattc 284
Query: 1977 attgctatagtgaatactgacaccggtaatgcaatacggaaac-agaataagtttttatg 2035
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 283 attgctatagtgaatactgacaccggtaatgcaatacggaaacaagaataagtttttatg 224
Query: 2036 agaattcaaatttggataaacatacagacaattaatttgcatcagtttaagcacctaaaa 2095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 agaattcaaatttggataaacatacagacaattaatttgcatcagtttaagcacctaaaa 164
Query: 2096 cttaat 2101
||||||
Sbjct: 163 cttaat 158
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,563
Number of extensions: 8019
Number of successful extensions: 8019
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8017
Number of HSP's successfully gapped: 1
Length of query: 2101
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2084
Effective length of database: 8,119,229
Effective search space: 16920473236
Effective search space used: 16920473236
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)