BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01883 (UTR included)
(2788 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2407_C1 1413 0.0
BF01005A2A06 773 0.0
>BF14_2407_C1
Length = 1314
Score = 1413 bits (713), Expect = 0.0
Identities = 740/749 (98%)
Strand = Plus / Plus
Query: 942 aaggttgaaggattcatagtgggcgaggacgtcgcctccagccacaacaaaaccggtgga 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aaggttgaaggattcatagtgggcgaggacgtcgcctccagccacaacaaaaccggtgga 625
Query: 1002 agaggtatgtgtggcgaagtgttcatctttaagatgtgtggggcgatgtctgctaaagga 1061
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 626 agaggtatgtgtggcgaagtgttcatctttaagatgtgcggagcgatgtctgctaaagga 685
Query: 1062 agtgatttagaatctataaggagcatggctgagagcgttaataaaaatatggccacctta 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 agtgatttagaatctataaggagcatggctgagagcgttaataaaaatatggccacctta 745
Query: 1122 ggaatttgtctgactgcatgttctttgccggggcaaccccctttgttcgagaccaaccat 1181
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ggaatatgtctgacttcatgttctttgccggggcaaccccctttgttcgagaccaaccca 805
Query: 1182 ggcgagatggaagtgggagtaggagttcacggggaggccggggtggagaagagaaaggtg 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ggcgagatggaagtgggagtaggagttcacggggaggccggggtggagaagagaaaggtg 865
Query: 1242 ggcaccgcccgggacacggtcagcatgatcctggacaagatagtatctcatctcaaacta 1301
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 ggcactgcccgggacacggtcagcatgatcctggacaagatagtatctcatctcaaacta 925
Query: 1302 gggtctggtaatagagtggcagctatgataaataatatgggcggcacctccttgctggag 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 gggtctggtaatagagtggcagctatgataaataatatgggcggcacctccttgctggag 985
Query: 1362 atgaacatagtggcagctgaaatcaaggattacctggattctaaacagattaaaatggaa 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 atgaacatagtggcagctgaaatcaaggattacctggattctaaacagattaaaatggaa 1045
Query: 1422 cgtctctactccggtcatctgaagacatcattggaaatgcaaggctttcaaatttgtctt 1481
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 cgtctctactccggtcacctgaagacatcattggaaatgcaaggctttcaaatttgtctt 1105
Query: 1482 ttaaatctgagtcatcgggatggtgacttctggctcgaattgctggacgctcccacaaca 1541
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 ttaaatctgagccatcgggatggtgacttctggctcgaattgctggacgctcccacaaca 1165
Query: 1542 gcggcggtctggtcggggggacctatgtcgcgaggggaacacgggcctcatgaagacgat 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 gcggcggtctggtcggggggacctatgtcgcgaggggaacacgggcctcatgaagacgat 1225
Query: 1602 gacagcttggtagaatcacgagatgataagatgatatccggtccagtattctctaactcc 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 gacagcttggtagaatcacgagatgataagatgatatccggtccagtattctctaactcc 1285
Query: 1662 gagcaagagctgatgaggtctagtctgtt 1690
|||||||||||||||||||||||||||||
Sbjct: 1286 gagcaagagctgatgaggtctagtctgtt 1314
Score = 799 bits (403), Expect = 0.0
Identities = 412/415 (99%)
Strand = Plus / Plus
Query: 488 aaggtaacacacaatgggttctcgtaaagtgacaactaagatcataaactcccccgagag 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aaggtaacacacaatgggttctcgtaaagtgacaactaagatcataaactcccccgagag 213
Query: 548 ctgcgtggatgataatctacgtgggttggtgacgttatacccccaactacaactgcatcc 607
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ctgcgtggatgacaatcttcgtgggttggtgacgttatacccccaactacaactgcatcc 273
Query: 608 cagacacagggtggtcactttaagaaggaaggatgaatctggcagagtagctgttatgag 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cagacacagggtggtcactttaagaaggaaggatgaatctggcagagtagctgttatgag 333
Query: 668 tggaggtggctccggccatgaaccgtttgctgcaggtcttataggcgagggtatgttaga 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tggaggtggctccggccatgaaccgtttgctgcaggtcttataggcgagggtatgttaga 393
Query: 728 cggagcggtggctggcggcgtgttcgcgtcgcctccgactggcaacatcctgtacggaat 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cggagcggtggctggcggcgtgttcgcgtcgcctccgactggcaacatcctgtacggaat 453
Query: 788 cacacagctttataaatacaattctggcggtgttctggtgttgctaggtaattacactgg 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cacacagctttataaatacaattctggcggtgttctggtgttgctaggtaattacactgg 513
Query: 848 agatagattgaatttcggcaaggctttcgaaaaggccaagattgctggaattaag 902
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 514 agatagattgaatttcggcaaggctttcgaaaaggctaagattgctggaattaag 568
>BF01005A2A06
Length = 435
Score = 773 bits (390), Expect = 0.0
Identities = 405/410 (98%)
Strand = Plus / Plus
Query: 2020 cggagccgggggataggaccatgctggacccgctgcaccaggcggccctggcggtcaaac 2079
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 cggagccgggggataggaccatgctggaccctctgcaccaggcggccctggcggtcaaac 60
Query: 2080 aaaacctcggcagcgatctaaaaacagttctggcgaggatgaaggaagcggcagaaagag 2139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaacctcggcagcgatctaaaaacagttctggcgaggatgaaggaagcggcagaaagag 120
Query: 2140 gcgcgacagacaccgcccatatggttgcgagagctggtcgtgcgtcctacgtgagtaaga 2199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgcgacagacaccgcccatatggttgcgagagctggtcgtgcgtcctacgtgagtaaga 180
Query: 2200 accgtctccgagacgaggacgcgggggctcgagcagtgtcctgttggatgaaggcgttgc 2259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accgtctccgagacgaggacgcgggggctcgagcagtgtcctgttggatgaaggcgttgc 240
Query: 2260 tggacaccataatgtcagccataaactaggcctttcattttcttgaaggtcggaccgaaa 2319
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggacaccgtaatgtcagccataaactaggcctttcattttcttgaaggtcggaccgaaa 300
Query: 2320 cttgtctgccgtacagaggaccatattacggagacagcgctccataaatgtcaacgaaat 2379
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttgtctgccgtacagaggacaatattacggagacagcgctccataaatgtcaacgaaat 360
Query: 2380 aattgtgttatatcagttatcctgaacagtaatatatttttctatattca 2429
||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 361 aattgtgttatatcagttatcctgaacagtaatatatttttttattttca 410
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 319,731
Number of extensions: 6840
Number of successful extensions: 6840
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6840
Number of HSP's successfully gapped: 3
Length of query: 2788
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2771
Effective length of database: 8,119,229
Effective search space: 22498383559
Effective search space used: 22498383559
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)