BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01908 (UTR included)
(1888 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024B1F02 1400 0.0
BF01018B2A11 208 2e-53
BF01016B1A11 159 2e-38
BF01056B1D01 145 3e-34
BF01030A2C06 129 2e-29
>BF01024B1F02
Length = 822
Score = 1400 bits (706), Expect = 0.0
Identities = 756/773 (97%), Gaps = 6/773 (0%)
Strand = Plus / Plus
Query: 851 gtttacgggtatggtctcttgcccagcaaaatttctgtatgaagaattcaaaacgaacct 910
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 gtttacgggtatggtttcttgcccagcaaaatttctgtatgaagaattcaaaacgaacct 109
Query: 911 cacaaagcttccggaatggaatccgacaatattgaagagcgaattgatcaaggaaatcgg 970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 cacaaagcttccggaatggaatccgacaatattgaagagcgaattgatcaaggaaatcgg 169
Query: 971 gccgggcatcgatctgtcctaccaagtgacagccggcggtggccggggtataattgcgcc 1030
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gccgggcatcgatctgtcataccaagtgacagccggcggtggccggggtataattgcgcc 229
Query: 1031 ccgcgacttcgtcatactcagacggacggccgcccttaataagatggggaaattggacga 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ccgcgacttcgtcatactcagacggacggccgcccttaataagatggggaaattggacga 289
Query: 1091 taatgacccctactgttatattagcagtggggtcagtgtcactgtgccgggatacccgcc 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 taatgacccctactgttatattagcagtggggtcagtgtcactgtgccgggatacccgcc 349
Query: 1151 atgcaatgatctggttagaggtcacaataaagtgggctgctggcgcatgactcccaagat 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 atgcaatgatctggttagaggtcacaataaagtgggctgctggcgcatgactcccaagat 409
Query: 1211 ggtggaagtaaataataaaatggagcaacaaactgtcttccaatggctgatgtgctgtga 1270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ggtggaagtaaataataaaatggagcaacaaactgtcttccaatggctgatgtgctgtga 469
Query: 1271 ccttaaaggtaaaataccccaatttgtgctggatgcggccttcgcctcagtgatgttgga 1330
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 470 ccttaaaggtaaaattccccaatttgtgctggatgcggccttcgcctcagtaatgttgga 529
Query: 1331 ctacatcatacatgtcagaaaatatgcagcggaaagcaaagccaagggactcttctaatg 1390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ctacatcatacatgtcagaaaatatgcagcggaaagcaaagccaagggactcttctaatg 589
Query: 1391 agaaatcgagatatctgaatataatgtatatcttcatttgtaatacaaaaatgtatatat 1450
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 590 agaaatcgagatatctgaatataatgtatatcttcatttgtaatacaaaaatggatatat 649
Query: 1451 tataagtttgaatttaatttgatatgattttaatgtgaaagataaaatttataatttatt 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tataagtttgaatttaatttgatatgattttaatgtgaaagataaaatttataatttatt 709
Query: 1511 tatggttttttattcactcatccatacgaatgttcttatgaagccggtcgctgttgtcgg 1570
|||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 710 tatggttttttattaattcatccatacaaatgttcatatgaagccggtcgctgttgtcgg 769
Query: 1571 gagattgttccgctataaaga------atatgtaaaatagtataatttacatc 1617
|||||||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct: 770 gagattgtcccgctatacagaatatttatatgtaaaatagtataatttacatc 822
>BF01018B2A11
Length = 733
Score = 208 bits (105), Expect = 2e-53
Identities = 252/300 (84%), Gaps = 7/300 (2%)
Strand = Plus / Minus
Query: 1 ggtggaattgtgtatcttatataggtctacagaaaagaccggggtgacatatgtctatac 60
||||||||||||||| ||||| || ||||||||||| ||| ||| ||||||||| ||||
Sbjct: 712 ggtggaattgtgtattttataaagatctacagaaaaatccgcggtaacatatgtccatac 653
Query: 61 cttaaggataatatactatttccat------acttttaaaaattggcattcctaaagcgt 114
||||||||||| || |||| | || || ||||||||||| || ||||||||| |
Sbjct: 652 cttaaggataacatgctatataaattttacaacatttaaaaattgtcactcctaaagctt 593
Query: 115 ttattggcaagctatttacataattacggtattaagtctcatcaaaataattgacttcgt 174
||||||| |||||||||| ||| |||||||||| ||| || ||||| | | |||||||
Sbjct: 592 ttattggaaagctatttatatatacacggtattaa-tcttatgaaaatgaattacttcgt 534
Query: 175 tttcaagcctacatcagtatctgaaaattattctttaaatcatttaactcgggcctaccg 234
|||||||||||||||| | ||| |||||| | |||||||||||||| |||||| |||||
Sbjct: 533 tttcaagcctacatcactttctttaaattactttttaaatcatttaaatcgggcgtaccg 474
Query: 235 ttggaaagttatcataatataagtttaataattctcaaaattaaataggctattttatat 294
|| ||||| ||||||||||||| ||||| ||| ||||||||||||||||| |||||||||
Sbjct: 473 tttgaaaggtatcataatataaatttaaaaatgctcaaaattaaataggccattttatat 414
>BF01016B1A11
Length = 786
Score = 159 bits (80), Expect = 2e-38
Identities = 147/170 (86%), Gaps = 7/170 (4%)
Strand = Plus / Minus
Query: 2 gtggaattgtgtatcttatataggtctacagaaaagaccggggtgacatatgtctatacc 61
|||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||
Sbjct: 333 gtggaattgtgtatcttatataggtctacagaaaagtccgcggtggcatatgtctatacc 274
Query: 62 ttaaggataatatactatttcca-------tacttttaaaaattggcattcctaaagcgt 114
|||||||||| |||||| | | | |||| ||||||| ||||||||||||||
Sbjct: 273 ttaaggataacatactactactaatcttacaacttataaaaatcttcattcctaaagcgt 214
Query: 115 ttattggcaagctatttacataattacggtattaagtctcatcaaaataa 164
||||||| ||||||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 213 ttattggaaagctatttacataaatacggcattaagtcttatcaaaataa 164
Score = 145 bits (73), Expect = 3e-34
Identities = 106/117 (90%)
Strand = Plus / Minus
Query: 199 aaattattctttaaatcatttaactcgggcctaccgttggaaagttatcataatataagt 258
|||||| | |||||||||||||| || ||| |||| || |||||||||||| ||||||||
Sbjct: 165 aaattactttttaaatcatttaaatcaggcgtaccatttgaaagttatcattatataagt 106
Query: 259 ttaataattctcaaaattaaataggctattttatattttttgtaaagagcccgtgcg 315
||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 105 ttagtaattctcaaaattaaataggctattttatattttttctaaagtgcccgtgcg 49
>BF01056B1D01
Length = 838
Score = 145 bits (73), Expect = 3e-34
Identities = 123/139 (88%), Gaps = 3/139 (2%)
Strand = Plus / Minus
Query: 171 tcgttttcaagcctacatcagtatctgaaaattattctttaaatcatttaactcgggcct 230
||||||| |||||||||||| |||||| |||||| | |||||||||||||| || ||| |
Sbjct: 449 tcgtttttaagcctacatcactatctgtaaattactttttaaatcatttaagtcaggcgt 390
Query: 231 accgttggaaagttatcataatataagt---ttaataattctcaaaattaaataggctat 287
||| || | ||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 389 accatttgcaagttatcataatataagtctaataataattctcaaaattaaaaaggctat 330
Query: 288 tttatattttttgtaaaga 306
|||||||||||||||||||
Sbjct: 329 tttatattttttgtaaaga 311
>BF01030A2C06
Length = 599
Score = 129 bits (65), Expect = 2e-29
Identities = 115/131 (87%), Gaps = 3/131 (2%)
Strand = Plus / Minus
Query: 171 tcgttttcaagcctacatcagtatctgaaaattattctttaaatcatttaactcgggcct 230
||||||| |||||||||||| |||||| |||||| | |||||||||||||| || ||| |
Sbjct: 131 tcgtttttaagcctacatcactatctgtaaattactttttaaatcatttaaatcaggcgt 72
Query: 231 accgttggaaagttatcataatataagtttaa---taattctcaaaattaaataggctat 287
||| || | ||||||||||||||||||||||| |||| |||||||||||| |||||||
Sbjct: 71 accatttgcaagttatcataatataagtttaataataatcctcaaaattaaaaaggctat 12
Query: 288 tttatattttt 298
|||||||||||
Sbjct: 11 tttatattttt 1
Score = 71.9 bits (36), Expect = 4e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 4 ggaattgtgtatcttatataggtctacagaaaagaccggggtgacatatgtctatacctt 63
|||||| |||||||||||||| |||||||||||| | | || ||||||||||||||||
Sbjct: 308 ggaattttgtatcttatatagatctacagaaaagttcccgatggcatatgtctatacctt 249
Query: 64 aaggataatatactat 79
|||||| | |||||||
Sbjct: 248 aaggattacatactat 233
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 308,454
Number of extensions: 8120
Number of successful extensions: 8120
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 8115
Number of HSP's successfully gapped: 10
Length of query: 1888
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1871
Effective length of database: 8,119,229
Effective search space: 15191077459
Effective search space used: 15191077459
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)