BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01916 (UTR included)
(2029 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_539_C1 1719 0.0
>BF14_539_C1
Length = 906
Score = 1719 bits (867), Expect = 0.0
Identities = 895/906 (98%)
Strand = Plus / Plus
Query: 775 atcagttcctggctgaagaggaggaaggcgacgaggacacaacagatgaagtctttaatg 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcagttcctggctgaagaggaggaaggcgacgaggacacaacagatgaagtctttaatg 60
Query: 835 gcttggatgaatctattaaacggcccaagttgggttacaccatgagaaagaaattgctta 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcttggatgaatctattaaacggcccaagttgggttacaccatgagaaagaaattgctta 120
Query: 895 tgaacaagagaagaacaattgacgttgatatggacaagctgatagaactggtgcaggcca 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaacaagagaagaacaattgacgttgatatggacaagctgatagaactggtgcaggcca 180
Query: 955 gggagattatatggaacagacagctgaagggacatcacaattggtataaattggatgaaa 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggagattatatggaacagacagctgaagggacatcacaattggtataaattggatgaaa 240
Query: 1015 gttggaaagaaatttctcaacaacttggagttacgcgcgatgaagccaggcttaaatgga 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttggaaagaaatttctcaacaacttggagttacgcgcgatgaagccaggcttaaatgga 300
Query: 1075 aatatctacgcgaccaagctagaaaggaatgtcgtaagcaagtatcagaatgggaatatc 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatatctacgcgaccaagctagaaaggaatgtcgtaagcaagtatcagaatgggaatatc 360
Query: 1135 taccgaagcttcagttcttaacaaatcagtttaatgactacgaaggtcatgacacaacag 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taccgaagcttcagttcttaacaaatcagtttaatgactacgaaggtcatgacacaacag 420
Query: 1195 acgaccacttcaaccaggacttcgaacccacgcctgaacaaagcagcagttattacttgg 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acgaccacttcaaccaggacttcgaacccacgcctgaacaaagcagcagttattacttgg 480
Query: 1255 aaccacctgcaacaaatgatataagtgtcaaagatgatgaattcgacgaattcgatacta 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaccacctgcaacaaatgatataagtgtcaaagatgatgaattcgacgaattcgatacta 540
Query: 1315 aacctatcataatggagacagatttttacgatgacgatgatgaagcccaaaaagggacag 1374
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 541 aacctatcataatggagacagatttttacgacgacgatgatgaagcccaaaaagggacag 600
Query: 1375 gaaatgttggaactcctgaaccagctaaggacgaagatatcggttttttcaatagtctca 1434
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 601 gaaatgttggaactcctgaaccagctaaggacgaagatatcggtttcttcaatagtctca 660
Query: 1435 taccccatgttaagaaactactgccagcgaagaaattgatgctgcggatgaagatccagg 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 taccccatgttaagaaactactgccagcgaagaaattgatgctgcggatgaagatccagg 720
Query: 1495 aactggtttataatacagtgtacagtgagacctagtacaggccttttgggggtgaagacc 1554
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 721 aactggtttataatacagtgtacagtgagacctaggacaggccttttgggggtgaagacc 780
Query: 1555 ctcaattttattgacgttttgtaatttaagtgctgtgcaaaccataaggaacaatgaaaa 1614
||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||
Sbjct: 781 ctcaattttattgacgttttgtaatttaagtgcagtgcaaatcatnnnnnacaatgaaaa 840
Query: 1615 aacaacatttttaggcaatgttttgctgaaagttctgatatatgtactggttttaggatc 1674
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aacaaaatttttaggcaatgttttgctgaaagttctgatatatgtactggttttaggatc 900
Query: 1675 catatg 1680
||||||
Sbjct: 901 catatg 906
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 245,734
Number of extensions: 5106
Number of successful extensions: 5106
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5105
Number of HSP's successfully gapped: 1
Length of query: 2029
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2012
Effective length of database: 8,119,229
Effective search space: 16335888748
Effective search space used: 16335888748
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)