BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01970 (UTR included)
(1573 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A1A09 1394 0.0
BF14_1629_C1 212 1e-54
>BF01022A1A09
Length = 776
Score = 1394 bits (703), Expect = 0.0
Identities = 744/759 (98%)
Strand = Plus / Plus
Query: 603 gatattggtcataaagtggtaccagttctagattacgatcgtgttaaaaattacgtgcaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gatattggtcataaagtggtaccagttctagattacgatcgtgttaaaaattacgtgcaa 71
Query: 663 actcgtaccaagcgagataaatatataaacatccacggcattatacgaggtgtgtatttc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 actcgtaccaagcgagataaatatataaacatccacggcattatacgaggtgtgtatttc 131
Query: 723 agaaacgtgaaagaataccgaccggattccaacaatgagttctcctgtctcacatcccac 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 agaaacgtgaaagaataccgaccggattccaacaatgagttctcctgtctcacatcccac 191
Query: 783 cagaaaatacccattgaacaattaaacgatgacttttgtgattgtgaggatgggtcggat 842
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 192 cagaaaatacccattgaacaattaaacgatgacttttgtgattgtgaggatgggtcagat 251
Query: 843 gagcccagtacgacagcttgccctaatgggatattttactgcgatacccaatttagcaag 902
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gagtccagtacgacagcttgccctaatgggatattttactgcgatacccaatttagcaag 311
Query: 903 ggtagtgatgtgttcagcattccatcgaacaaagtcaatgatggcatctgtgattgctgc 962
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 312 ggtagtgatgtgttcagcattccatcgaacaaagtcaatgatggcatctgtgactgctgc 371
Query: 963 gatgggtcggatgagtttgaatatcctgatggaacgaagcttcttagtcagaatattaat 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gatgggtcggatgagtttgaatatcctgatggaacgaagcttcttagtcagaatattaat 431
Query: 1023 aaccggagattctatgtggacaagtgtatttccagatgtttcaggacttaattattgtag 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aaccggagattctatgtggacaagtgtatttccagatgtttcaggacttaattattgtag 491
Query: 1083 gatgtgaattcttataggttgtataatttactcgttgagaaccaaaaacaaatacatatg 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gatgtgaattcttataggttgtataatttactcgttgagaaccaaaaacaaatacataca 551
Query: 1143 ctaagtttatagtatatgtctaggtacttaaatattaaatgtaaataaactatgtgattt 1202
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctaagtttatagtatatgtctaggtacttaaatattaaatgtaaataaactatgtgatta 611
Query: 1203 aatttgaaatattaaacattgccagtcttgttttcatatgtaagaaaatctttatattta 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aatttgaaatattaaacattgccagtcttgttttcatatgtaagaaaatctttatattta 671
Query: 1263 aataatacttattcctttttttaagtgaatgatatttatggtgtcacttttcgtaacaat 1322
||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 672 aataatacttattccgttttttaagtgtatgatatttatggtgtcactttnngtaacaac 731
Query: 1323 aattactccaatattctgaacaatttattatataaatat 1361
|||||| |||||||||||||||||||||||||||||
Sbjct: 732 cattacttnnatattctgaacaatttattatataaatat 770
>BF14_1629_C1
Length = 796
Score = 212 bits (107), Expect = 1e-54
Identities = 107/107 (100%)
Strand = Plus / Minus
Query: 1 tttacaaccaatatttgtaaccaattcatttattggaagaaaaatgttcataacttaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tttacaaccaatatttgtaaccaattcatttattggaagaaaaatgttcataacttaaaa 49
Query: 61 ttaattttttattttgctacaacaaattacgatagtcaacacatatg 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 ttaattttttattttgctacaacaaattacgatagtcaacacatatg 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 280,954
Number of extensions: 6765
Number of successful extensions: 6765
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6764
Number of HSP's successfully gapped: 2
Length of query: 1573
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1556
Effective length of database: 8,119,229
Effective search space: 12633520324
Effective search space used: 12633520324
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)