BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01971 (UTR included)
(2395 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1043_C2 751 0.0
>BF14_1043_C2
Length = 1396
Score = 751 bits (379), Expect = 0.0
Identities = 515/568 (90%), Gaps = 43/568 (7%)
Strand = Plus / Plus
Query: 1865 agacggcgacggacggttccagaacatgtgaaccagcacaggcggtggagcggtcggagg 1924
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 agacggcgacggaaggttccagaacatgtgaaccagcacaggcggtggagcggtcggagg 114
Query: 1925 ggatatgtttaatagttaaagctcgtgtgtatacaaggtactagcctcgctactatacta 1984
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 115 ggatatgtttaatagttaaagctcgtgtgtatacaaggtactagcctcactacta----- 169
Query: 1985 gatagggtccacatccaggcaagttcagatcagg-----------------tacgttccc 2027
|||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 170 gatagggtccacatccaggcaagttcagttcaggctaccacctaccggaggtacgttccc 229
Query: 2028 gtggacactattctcacttagtttttgcatcatcaaactaaacacagcaagtcagtcgct 2087
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 230 ctggacactattctcacttagtttttgcatcatcaaactaaacacagca-gccagtcgcc 288
Query: 2088 cattcta--------------------agctcgttgctagcggcgtgtcccggaaccaaa 2127
||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 289 cattctagtctgccgcgcggccgaggaagctcgttgctagcggcgtgtcgcggaaccaaa 348
Query: 2128 gaaatattcacgagttgtaatcattataataatacatgtccttaccagccgtcgcacact 2187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gaaatattcacgagttgtaatcattataataatacatgtccttaccagccgtcgcacact 408
Query: 2188 gtgggaaactcgtacgactcgtctcaaaactccgtaccgcgcttatttcaaaactaaatg 2247
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gtgggaaactcgtatgactcgtctcaaaactccgtaccgcgcttatttcaaaactaaatg 468
Query: 2248 ttctgtaattttgcgcacatacacgtgaaagtataaggtgtaatagaaaaaattattatt 2307
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttctgtaattatgcgcacatacacgtgaaagtataaggtgtaatagaaaaaattattatt 528
Query: 2308 ttgacaattatgtttattaatttatttaaaaaataaaacttaaaaacacacatgcattta 2367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttgacaattatgtttattaatttatttaaaaaataaaacttaaaaacacacatgcattta 588
Query: 2368 taagagaaaaacatttttatttgtaatt 2395
||||| ||||||||||||||||||||||
Sbjct: 589 taagaaaaaaacatttttatttgtaatt 616
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 252,794
Number of extensions: 5922
Number of successful extensions: 5922
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5921
Number of HSP's successfully gapped: 3
Length of query: 2395
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2378
Effective length of database: 8,119,229
Effective search space: 19307526562
Effective search space used: 19307526562
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)