BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01978 (UTR included)
(2215 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2770_C1 1733 0.0
>BF14_2770_C1
Length = 942
Score = 1733 bits (874), Expect = 0.0
Identities = 880/883 (99%)
Strand = Plus / Plus
Query: 697 ctgttagcaaacaagaggtgcctcctctttttgttattgaattcctacatagagttgtgg 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctgttagcaaacaagaggtgcctcctctttttgttattgaattcctacatagagttgtgg 61
Query: 757 atacattccaggattacttttctgattgcactgaaacaattattaaggagaactatgttg 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atacattccaggattacttttctgattgcactgaaacaattattaaggagaactatgttg 121
Query: 817 ttgtttatgagctgttggatgagatgttagacaatggttttccattggccaccgagagca 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttgtttatgagctgttggatgagatgttagacaatggttttccattggccaccgagagca 181
Query: 877 acattttgaaggaattgataaaaccacctaatatatttagaacaatagccaacactgtga 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acattttgaaggaattgataaaaccacctaatatatttagaacaatagccaacactgtga 241
Query: 937 caggcaaatcaaatgtatcatcaatattacctggtggacaactttctaatgtgccatggc 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caggcaaatcaaatgtatcatcaatattacctggtggacaactttctaatgtgccatggc 301
Query: 997 gtagaacgggagtcaagtatgctaataatgaagcgtactttgatgttattgaggaagttg 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtagaacgggagtcaagtatgctaataatgaagcgtactttgatgttattgaggaagttg 361
Query: 1057 atgcaattatagataaaagtggatctactgtatctgctgaaatacagggatatattgact 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atgcaattatagataaaagtggatctactgtatctgctgaaatacagggatatattgact 421
Query: 1117 gctgtatcaagctgagtggtaagccagatctgaccttgtcattcgtgaatccaaggctgt 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gctgtatcaagctgagtggtaagccagatctgaccttgtcattcgtgaatccaaggctgt 481
Query: 1177 ttgatgatgtatctttccacccttgtgtgagatttaaaagatgggagtctgaaagaatat 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ttgatgatgtatctttccacccttgtgtgagatttaaaagatgggagtctgaaagaatat 541
Query: 1237 tatctttcataccaccggatggtaacttcagactgatgtcatatcacattggttcacaaa 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tatctttcataccaccggatggtaacttcagactgatgtcatatcacattggttcacaaa 601
Query: 1297 gtgttgtggcaattcctatctatgtgagacataatctatcattacgaaccaatggggatc 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gtgttgtggcaattcctatctatgtgagacataatctatcattacgaaccaatggggatc 661
Query: 1357 aagggcgatttgacatgactgttggtcctaaacaaaccatgggcaggaccttggaaaatg 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aagggcgatttgacatgactgttggtcctaaacaaaccatgggcaggaccttggaaaatg 721
Query: 1417 tagccttagagatctgtatgccaaaatgtgttctcaactgttcactaactgctaatcaag 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tagccttagagatctgtatgccaaaatgtgttctcaactgttcactaactgctaatcaag 781
Query: 1477 gaaaatattcatatgatccggttagtaaagtattgttgtgggacattggacgtattgaac 1536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gaaaatattcatatgatccggttagtaaagtattgttgtgggacattggacgtattgaac 841
Query: 1537 taccgaagttgccgaatatacgaggaactgtgtccctagcatc 1579
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 842 taccgaagttgccgaatatacgnnnaactgtgtccctagcatc 884
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 325,258
Number of extensions: 19050
Number of successful extensions: 19050
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19050
Number of HSP's successfully gapped: 1
Length of query: 2215
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2198
Effective length of database: 8,119,229
Effective search space: 17846065342
Effective search space used: 17846065342
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)