BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01989 (UTR included)
(1897 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3025_C1 1148 0.0
>BF14_3025_C1
Length = 768
Score = 1148 bits (579), Expect = 0.0
Identities = 614/628 (97%), Gaps = 12/628 (1%)
Strand = Plus / Plus
Query: 439 gtcaataatcaacaatgagtcacatagatttggacaagcctcgttatgatcagagtacgt 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gtcaataatcaacaatgagtcacatagatttggacaagcctcgttatgatcagagtacgt 200
Query: 499 acatgggtagggcgaaacatttccttctgctaacaaatcccatgaacgttttcgcaagca 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatgggtagggcgaaacatttccttctgctaacaaatcccatgaacgttttcgcaagca 260
Query: 559 acaaagatcttgaggatgctaggaagattgtcactgagttcaggaagagtcgtaggatgc 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaagatcttgaggatgctaggaagattgtcactgagttcaggaagagtcgtaggatgc 320
Query: 619 cagccggctacgacgaggacaaattgtgggctaccaagtatttgtatgatagcgccttcc 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagccggctacgacgaggacaaattgtgggctaccaagtatttgtatgatagcgccttcc 380
Query: 679 acccggacacgggggagaagatgatcgccatcggacggatgtcggctcaggctccaatga 738
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atccggacacaggggagaagatgatcgccatcggacggatgtcggctcaggctccaatga 440
Query: 739 acacaatcatcacaggatgcatgataaccttttataagacaacagcggcgaccgtctttt 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acacaatcatcacaggatgcatgataaccttttataagacaacagcggcgaccgtctttt 500
Query: 799 ggcagtgggtcaatcagacgtttaatgccctcgtaaactataccaacagagggggcgacg 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcagtgggtcaatcagacgtttaatgccctcgtaaactataccaacagagggggcgacg 560
Query: 859 ctcccttaccgacatcccagttattggcgtcgtattgtgccgcgtgtggtggggcgttgt 918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcccttaccgacatcccagttattggcgtcgtattgtgccgcgtgtggtggggcgttgt 620
Query: 919 ctactgcactttttctcaacagcaaggttaagaacctgccaccgatttatgcttccctgg 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctactgcactttttctcaacagcaaggttaagaacctgccaccgatttatgcttccctgg 680
Query: 979 tacctttcgccgcggtttgcggcgctaacttcataaacatacctat------------tg 1026
|||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 681 tacctttcgccgcggtttgcggcgctaacttcataaacatacctatgatgaggagcggtg 740
Query: 1027 aactgttgaatggtacgccggtgttcac 1054
||||||||||||||||||||||||||||
Sbjct: 741 aactgttgaatggtacgccggtgttcac 768
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 269,478
Number of extensions: 6678
Number of successful extensions: 6678
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6678
Number of HSP's successfully gapped: 1
Length of query: 1897
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1880
Effective length of database: 8,119,229
Effective search space: 15264150520
Effective search space used: 15264150520
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)