BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN01994 (UTR included)
(8785 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01036X1A07 1562 0.0
BF14_2893_C1 147 4e-34
>BF01036X1A07
Length = 815
Score = 1562 bits (788), Expect = 0.0
Identities = 807/815 (99%)
Strand = Plus / Plus
Query: 6948 gaaaatccgaagctgggcccccacttgtcgctggtggtgtgggcggcggcgttggcggcg 7007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaaatccgaagctgggcccccacttgtcgctggtggtgtgggcggcggcgttggcggcg 60
Query: 7008 ggcgctctggtcacgtggctgccacgcggctcgggggcgagggcgctactcgcgaccggc 7067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcgctctggtcacgtggctgccacgcggctcgggggcgagggcgctactcgcgaccggc 120
Query: 7068 atcgtcaggctcatcttctccgctgggcctgagcccacactgtggacgctgggcatgctc 7127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcgtcaggctcatcttctccgctgggcctgagcccacactgtggacgctgggcatgctc 180
Query: 7128 actatagtggtgaagggcatccacttggtgagtatcatgggtaaccagggcaccctgtcc 7187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actatagtggtgaagggcatccacttggtgagtatcatgggtaaccagggcaccctgtcc 240
Query: 7188 aagtccacgcgccacgtcatcacagaccctgaactgctctaccatggggtctacctcggc 7247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagtccacgcgccacgtcatcacagaccctgaactgctctaccatggggtctacctcggc 300
Query: 7248 ttctgtttccttggaatttgttgccatccattcttcttctccgttctgttactagacatc 7307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttctgtttccttggaatttgttgccatccattcttcttctccgttctgttactagacatc 360
Query: 7308 gtgtaccgcgaggagacgttgttgaacgtgatgagatctgtgactcgcaacggccggtcc 7367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgtaccgcgaggagacgttgttgaacgtgatgagatctgtgactcgcaacggccggtcc 420
Query: 7368 atcctgctgacggccgtgctggcgctggtcctggtctatatgttctccatcgtaggctac 7427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcctgctgacggccgtgctggcgctggtcctggtctatatgttctccatcgtaggctac 480
Query: 7428 atgttcttcagagaccacttcctcgtcaacgtcgatagactagacgatgacaacgatcct 7487
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 481 atgttcttcagagaccacttcctcgttaacgtcgatagactagacgatgacaacgatcct 540
Query: 7488 cgctacgagagtgaggcgtgttcgagcgagtcgtgtcgcgtggggcctgaccccgcggca 7547
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgctacgagagtgaggcgtgttcgagcgagtcgtgtcgcgtggggcctgaccccgcggct 600
Query: 7548 aagtacctccgggggccccggttcgtgtcggtaggagggggactgagagagagaagctgc 7607
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 601 aagtacctccgggggccccggttcgtgtcggtaggagggggcctgagagagagaagctgc 660
Query: 7608 gactcactcatcatgtgtatagtgaccacactcaaccagggcctccggaatggagggggc 7667
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 661 gactcactcatcatgtgtatagtgaccacactcaaccannnnntccggaatggagggggc 720
Query: 7668 ataggggatatactgcgggcgcctgctagctttgaaccgttgttcgtggcgcgcgtggtg 7727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ataggggatatactgcgggcgcctgctagctttgaaccgttgttcgtggcgcgcgtggtg 780
Query: 7728 tacgacctgttgttcttcttcgtggtcatcatcat 7762
|||||||||||||||||||||||||||||||||||
Sbjct: 781 tacgacctgttgttcttcttcgtggtcatcatcat 815
>BF14_2893_C1
Length = 1002
Score = 147 bits (74), Expect = 4e-34
Identities = 83/87 (95%)
Strand = Plus / Minus
Query: 8699 tccttgaagacatcttattgtatgatgttcttcgagtattctatatacaattatattcgt 8758
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 1002 tccttgaagacatcttattgtatgttgttcttnnngtattctatatacaattatattcgt 943
Query: 8759 aaattaattattattatatcatcaaag 8785
|||||||||||||||||||||||||||
Sbjct: 942 aaattaattattattatatcatcaaag 916
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 122,583
Number of extensions: 14624
Number of successful extensions: 14624
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 14623
Number of HSP's successfully gapped: 2
Length of query: 8785
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 8767
Effective length of database: 8,109,745
Effective search space: 71098134415
Effective search space used: 71098134415
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)