BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02016 (UTR included)
(2914 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A2D03 1265 0.0
BF01019A1E07 694 0.0
>BF01012A2D03
Length = 840
Score = 1265 bits (638), Expect = 0.0
Identities = 692/710 (97%), Gaps = 5/710 (0%)
Strand = Plus / Plus
Query: 2210 ctatgacctggtgttacacggcggcaccgtggaggataacctcgccaacgccaagtacgc 2269
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 12 ctatgacctggtgttacacggcggcaccgtggaggataacctcgcgaacgccaagtacgc 71
Query: 2270 tatatccatggcgaggcgctgtggcgcgcgagtgtacgcgctgcccgaggacatcaccga 2329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tatatccatggcgaggcgctgtggcgcgcgagtgtacgcgctgcccgaggacatcaccga 131
Query: 2330 gaggaagccgaagatgatcatgacggtgttcgcctgcctcatggcgctcgactacatccc 2389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gaggaagccgaagatgatcatgacggtgttcgcctgcctcatggcgctcgactacatccc 191
Query: 2390 cgccatggacgcgcccgccatgtaagacgaccctccaccgacatacgacattataattaa 2449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cgccatggacgcgcccgccatgtaagacgaccctccaccgacatacgacattataattaa 251
Query: 2450 aatgctatatatatacagaatacagaaaaaatatcattcgtactgcaagactaccgacga 2509
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 252 aatgctatatatatacagaatacagaaaaaaaatcattcgtactgcaagactaccggcga 311
Query: 2510 aaagatgactcacactatcgatatacaactatatatatatcctgtgggacaactgatgaa 2569
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 312 aaagatgactcacactatcgatatacaactatatatatatcctgtgggacagctgataaa 371
Query: 2570 atactatagaagtaaaaa-----tattttttttttacttctatagtaaatatatttgatc 2624
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||
Sbjct: 372 atactatagaagtaaagaaatttttttttttttttacttctatagtaaatatatttgatc 431
Query: 2625 atctccttgtccgtgtcccagattgtgttatcgtgtagcttctcttatattttatttatc 2684
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 432 atctcgatgtccgtgtcccagattgtgttatcgtgtagcttctcttatattttatttacc 491
Query: 2685 attttatatttgctttacgttttatttctgtgcggtctagactctagtctagactgtatt 2744
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 492 actttatatttgctttacgttttattcctgtgcggtctagactctagtctagactgtatt 551
Query: 2745 tataatctgtaatacatttgtatgaactaattagtataacaatatttactaaatgcagcg 2804
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 552 tataatctgtaatacatttgtatgaactaattagtataacaatatttactacatgcagcg 611
Query: 2805 tttgtatgaatgtttgctgaactcatataattcttatgattttattcccgaggagctcgt 2864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tttgtatgaatgtttgctgaactcatataattcttatgattttattcccgaggagctcgt 671
Query: 2865 gtcatgtgattgtggaagccatattttttattttaagtcattcctattta 2914
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtcatgtgattgtggaagccatattttttattttaagtcattcctattta 721
>BF01019A1E07
Length = 395
Score = 694 bits (350), Expect = 0.0
Identities = 381/395 (96%)
Strand = Plus / Plus
Query: 1745 tcctcacgtcaactggctgtactccgacctcacggacgggctcgtcatattccagctcta 1804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctcacgtcaactggctgtactccgacctcacggacgggctcgtcatattccagctcta 60
Query: 1805 cgacatcatcaagccggggatcgttaactggaagaaggtccatcgtcagttttctaagct 1864
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cnnnntcatcaagccggggatcgttaactggaagaaggtccatcgtcagttttctaagct 120
Query: 1865 tactcgttttatggagcgtctagagaactgtaactacgttgtggagttaggcaaagcgtt 1924
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 121 tactcgttttatggagcgtctagagaattgtaactacgttgtggagttaggcaaggcgtt 180
Query: 1925 gggcttttcactagtgggtatagcgggcgccgacatcaacgagggaaacgccacactcac 1984
|||||||||||| |||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 181 gggcttttcactnnngggtatagcgggcgccgacatcaacgagggaaacncnnnactcac 240
Query: 1985 tcttgctctcatatggcagttgatgcgcgcctacacgctgtcggtgttgactcgcctcgc 2044
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 tcttgctctcatatggcagttgatgcgcgcctacacgctgtcggtgctgactcgcctcgc 300
Query: 2045 caacaccggcaacccgatcatagagaaggagatagttcagtgggtcaataacaagctgca 2104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caacaccggcaacccgatcatagagaaggagatagttcagtgggtcaataacaagctgca 360
Query: 2105 ggccgctgggaagacctcctccatcaagaccttcc 2139
|||||||||||||||||||||||||||||||||||
Sbjct: 361 ggccgctgggaagacctcctccatcaagaccttcc 395
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 358,499
Number of extensions: 8084
Number of successful extensions: 8084
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8083
Number of HSP's successfully gapped: 2
Length of query: 2914
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2896
Effective length of database: 8,109,745
Effective search space: 23485821520
Effective search space used: 23485821520
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)