BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02018 (UTR included)
(2601 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_79_C1 987 0.0
BF01012A1B09 68 8e-11
>BF14_79_C1
Length = 1223
Score = 987 bits (498), Expect = 0.0
Identities = 526/535 (98%), Gaps = 4/535 (0%)
Strand = Plus / Plus
Query: 2071 caggtatgaatgcaagtcgttgtgtgcttgatgaggttacgagttttgggaagaaacggt 2130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 caggtatgaatgcaagtcgttgtgtgcttgatgaggttacgagttttgggaagaaacggt 172
Query: 2131 aatattgcgattcggtcctgcaatttgttaagttacagattgtatgatatttttgaacaa 2190
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aatattgcaattcggtcctgcaatttgttaagttacagattgtatgatatttttgaacaa 232
Query: 2191 gttatccgagattgacgggttactctgtgcacggatcgtttaaggtagtaggtgaatatg 2250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gttatccgagattgacgggttactctgtgcacggatcgtttaaggtagtaggtgaatatg 292
Query: 2251 gtaaaaaaaaaaa----ttttaggacgtttttttttttattcaaatagacatgtttattt 2306
||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 taaaaaaaaaaaaaaatttttaggacgtttttttttttattcaaatagacatgtttattt 352
Query: 2307 caatacaaaaataattgggatttaatacataaggacaattaatatatatttttttattat 2366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 caatacaaaaataattgggatttaatacataaggacaattaatatatatttttttattat 412
Query: 2367 atcaatactatccgatacattaaatctctcaaaatatgcaaattttaatagaattgaata 2426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atcaatactatccgatacattaaatctctcaaaatatgcaaattttaatagaattgaata 472
Query: 2427 taattttattattttgaaataagaatgattttaattaattgtctagtttacggaacaaac 2486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 taattttattattttgaaataagaatgattttaattaattgtctagtttacggaacaaac 532
Query: 2487 ttaaatctgaagtgtttgaaagcgattcagtaacatgtaatagatggaatttaggtttag 2546
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 533 ttaaatctgaagtgtttgaaagcgattcagtaacatgtaatagatggaaattaggtttag 592
Query: 2547 ttatagggctggttcccccgacatatatgtctgtcgcaatgacactgtccgctta 2601
||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 593 ttatagggctggttcccccgacatagatgtctgtcgcaatgacactgtccgctta 647
>BF01012A1B09
Length = 841
Score = 67.9 bits (34), Expect = 8e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 8 cgcgtagtgtatccgaaaaatattagtttcatttaaat 45
|||||||||||||||||| |||||||||||||||||||
Sbjct: 773 cgcgtagtgtatccgaaatatattagtttcatttaaat 736
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 334,590
Number of extensions: 10781
Number of successful extensions: 10781
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 10778
Number of HSP's successfully gapped: 2
Length of query: 2601
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2584
Effective length of database: 8,119,229
Effective search space: 20980087736
Effective search space used: 20980087736
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)