BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02019 (UTR included)
(1534 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01043A1F03 1386 0.0
BF01024A1C04 234 3e-61
>BF01043A1F03
Length = 751
Score = 1386 bits (699), Expect = 0.0
Identities = 738/751 (98%)
Strand = Plus / Plus
Query: 601 acgttgtgtgcggtccgactttgagtcgcgattactaccggccctggcgtcatcttgcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgttgtgtgcggtccgactttgagtcgcgattactaccggccctggcgtcatcttgcag 60
Query: 661 cggctgcaagggacgtcggttctagcatcaaaacggacaaggataagttccaagtcaacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggctgcaagggacgtcggttctagcatcaaaacggacaaggataagttccaagtcaacc 120
Query: 721 tagatgtgcaacatttcaaccctgaggagataagtgttaaaacatccgatggctatgtgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagatgtgcaacatttcaaccctgaggagataagtgttaaaacatccgatggctatgtgg 180
Query: 781 tggtggaagggaagcacgaagaaaagaaggaccagcatggatatatttcgcgtcagtttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtggaagggaagcacgaagaaaagaaggaccagcatggatatatttcgcgtcagtttt 240
Query: 841 gtcgccggtatgctctgccggaaggttgtgttcctgaaacggtggagtccagattgtcgt 900
||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 241 gtcgccggtatgctctgcccgagggttgtgttcctgaaaccgtggagtccagattgtcgt 300
Query: 901 ctgatggtgtgctaacaattatagcgccacggaaggtgccgccagcggttgagggtcagc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgatggtgtgctaacaattatagcgccacggaaggtgccgccagcggttgagggtcagc 360
Query: 961 gaaatgttccgatcactcagactgggcctgtgcgtaaggaggtcaaggatcaagccaatg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaatgttccgatcactcagactgggcctgtgcgtaaggaggtcaaggatcaagccaatg 420
Query: 1021 gagacaaggcttaagttttttaatgcttttccaagtcattccttctcactaagtcattct 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagacaaggcttaagttttttaatgcttttccaagtcattccttctcactaagtcattct 480
Query: 1081 tttccgctaagactgattatttttattttagtaatataatttggtttcctcagacgttgt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 481 tttccgctaagactgattatttttattttagtaatataatttggtttcctcagacattgt 540
Query: 1141 ttcattttcgttcatctaccatgattacgtattttatctagaactaactccagacatcca 1200
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 541 ttcattttcgttcatctaccatgattacgtattttaactagaactaactccagacatcca 600
Query: 1201 cagcaagagaagattgtatgtaattttctataaaagatacaaatgtattttatcagtttt 1260
|||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 601 cagcaagagacgattgtatgtaattttctatagaagatacaaatgtattttatcagttat 660
Query: 1261 actactaaccatcattggaaaactgaaaatagtcaaatactaaataagaaagtaaatatc 1320
| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 661 aatactaaccatcattggaaaactgaaaatatacaaatactaaataagaaagtatatatc 720
Query: 1321 tctaatcataaaatttcgtctttataaggat 1351
||||||||||||||||| |||||||||||||
Sbjct: 721 tctaatcataaaatttcatctttataaggat 751
>BF01024A1C04
Length = 815
Score = 234 bits (118), Expect = 3e-61
Identities = 160/173 (92%), Gaps = 2/173 (1%)
Strand = Plus / Plus
Query: 1364 atctttaagtcgttttagataaattatttattgcactggtttcaa--ttttatataacat 1421
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 6 atctttaagtcgttttagataaattatttattgtactggtttcaaatttttatataacat 65
Query: 1422 cgaattgtttaggttaaaattagctagcgtattaaaaatggtaaaggtaagtctcgtata 1481
|||||||||| || |||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 66 cgaattgtttcggcgaaaattagctagaatattaaaaatgataaaggtaagtctcgtata 125
Query: 1482 ttttattgttgaataattttccataatttttcatatttttttgttataattgc 1534
||||||||||| ||||||||| ||||||||||||| || ||||||||||||||
Sbjct: 126 ttttattgttggataattttcaataatttttcatagttctttgttataattgc 178
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 245,371
Number of extensions: 9807
Number of successful extensions: 9807
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9806
Number of HSP's successfully gapped: 2
Length of query: 1534
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1517
Effective length of database: 8,119,229
Effective search space: 12316870393
Effective search space used: 12316870393
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)