BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02026 (UTR included)
(3187 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046B2G01 1358 0.0
>BF01046B2G01
Length = 760
Score = 1358 bits (685), Expect = 0.0
Identities = 745/763 (97%), Gaps = 9/763 (1%)
Strand = Plus / Plus
Query: 1710 gcttccttgagggctgtccgcgacggagaactccagaaaccatatgacgtgtcttacgtc 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcttccttgagggctgtccgcgacggagaactccagaaaccatatgacgtgtcttacgtc 60
Query: 1770 ttcgcacaagttaatgcagataaggttctttggaaatactccggtgaaatacaaccatta 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttcgcacaagttaatgcagataaggttctttggaaatactccggtgaaatacaaccatta 120
Query: 1830 aaacttctagcacgtgatacgatatcaataggacagaatatatctacaaaagcaattggg 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaacttctagcacgtgatacgatatcaataggacagaatatatctacaaaagcaattggg 180
Query: 1890 cgaatggaaagagaggatataacaaatctctacaaatatccggaacgaacaaaagaagag 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgaatggaaagagaggatataacaaatctctacaaatatccggaacgaacaaaagaagag 240
Query: 1950 cgtgacacaatggagaaggctctccgtaaatctgagagcattttcgcaagatattatcta 2009
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtgacacaatggagatggctctccgtaaatctgagagcattttcgcaagatattatcta 300
Query: 2010 aatgacgcatttaatgatgtcaccttcgacttcgaattgagagacgatattaagatagga 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatgacgcatttaatgatgtcaccttcgacttcgaattgagagacgatattaagatagga 360
Query: 2070 caggatttcaacgttgcactacatataaagaaccgatctacaatcaacgagcatcatgtg 2129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caggatttcaacgttgcactacatataaagaaccgatctacaatcaacgagcatcatgtg 420
Query: 2130 aagggtgtactgcgagttgacactgtgacgtacactggcgtcaccggggacggggttaag 2189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagggtgtactgcgagttgacactgtgacgtacactggcgtcaccggggacggggttaag 480
Query: 2190 aggcatgagtttgacatgaagatggcaccagaaaagaaagaaaccatcacactgcctgtc 2249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggcatgagtttgacatgaagatggcaccagaaaagaaagaaaccatcacactgcctgtc 540
Query: 2250 acgttcaatgattatt-ta-----ttctttaaccaactagcgtccttcaacatagcttgt 2303
|||||||||||||||| || || || | || |||||||||||||||||||||
Sbjct: 541 acgttcaatgattattataagaagttggttgatca---ggcgtccttcaacatagcttgt 597
Query: 2304 ttggcgtcgatagtcgacaggaactttgactatttcgcacaagacgacttcagagttcgc 2363
|||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttggcgtcaatagttgataggaactttgactatttcgcacaagacgacttcagagttcgc 657
Query: 2364 aatcctgacattaagatctcgatcgacggcaaacctatttcacgacaggaattcaccgta 2423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 aatcctgacattaagatctcgatcgacggcaaacctatttcacgacaggaattcaccgta 717
Query: 2424 aacgtgaaattggaaaatcctcttccgataccattaaagagcg 2466
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 aacgtgaaattggaaaatcctcttccgataccattaaagagcg 760
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,484
Number of extensions: 6455
Number of successful extensions: 6455
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6455
Number of HSP's successfully gapped: 2
Length of query: 3187
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3169
Effective length of database: 8,109,745
Effective search space: 25699781905
Effective search space used: 25699781905
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)