BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02028 (UTR included)
(1930 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047A1F01 1118 0.0
>BF01047A1F01
Length = 782
Score = 1118 bits (564), Expect = 0.0
Identities = 593/604 (98%), Gaps = 9/604 (1%)
Strand = Plus / Plus
Query: 1336 cacctatgagatattgtccatacccgccgccggcacacccctcagcgaatcctccccggc 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cacctatgagatattgtccatacccgccgccggcacacccctcagcgaatcctccccggc 71
Query: 1396 ctgaacacgcgccctcgcccagacatccaatgtaaactaaatccttgttctatatctaaa 1455
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ctgagcacgcgccctcgcccagacatccaatgtaaactaaatccttgttctatatctaaa 131
Query: 1456 agtgctgtgaaagtgaaccgatgaaagacattcaggtgatgtaagactatgtacctaata 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 agtgctgtgaaagtgaaccgatgaaagacattcaggtgatgtaagactatgtacctaata 191
Query: 1516 aattaatataattccttagcttttaatagatgtattttagtaatttgaaggttcctaccc 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aattaatataattccttagcttttaatagatgtattttagtaatttgaaggttcctaccc 251
Query: 1576 caagtgtataactttaaatgtatagttagatcaattagaagacagttacctgcttatttt 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 caagtgtataactttaaatgtatagttagatcaattagaagacagttacctgcttatttt 311
Query: 1636 ttttttattctgtggcatttcagtgacatctaatact---------aaatctgtacagat 1686
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 312 ttttttattctgtggcatttcagtgacatctaatactatttatacgaaatctgtacagat 371
Query: 1687 aaaaaaatgtgttaaattatttattatataaccaaagattctaacagctatcagaataat 1746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aaaaaaatgtgttaaattatttattatataaccaaagattctaacagctatcagaataat 431
Query: 1747 gaaattacatagatgtgaaatttagccttacttaattattaatagacatgttaaaaagac 1806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gaaattacatagatgtgaaatttagccttacttaattattaatagacatgttaaaaagac 491
Query: 1807 attccactgtattgtatgctttaagatgttccgtttgatttaaactttcgatttgatgta 1866
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 492 attccactgtattgtatgctttaagatattccgtttgatttaaactttcgatttgatgta 551
Query: 1867 gtttaaaaaaaaaaattaacccgtctaaacatgtgtccgggaacagtatagaggataaaa 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gtttaaaaaaaaaaattaacccgtctaaacatgtgtccgggaacagtatagaggataaaa 611
Query: 1927 attt 1930
||||
Sbjct: 612 attt 615
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 271,273
Number of extensions: 7894
Number of successful extensions: 7894
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7894
Number of HSP's successfully gapped: 2
Length of query: 1930
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1913
Effective length of database: 8,119,229
Effective search space: 15532085077
Effective search space used: 15532085077
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)