BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02033 (UTR included)
(2089 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B2F04 1388 0.0
>BF01016B2F04
Length = 724
Score = 1388 bits (700), Expect = 0.0
Identities = 719/724 (99%), Gaps = 1/724 (0%)
Strand = Plus / Plus
Query: 225 atggtaattgaaaataattcacaaaaaatatttcgaagtgtatttaattt-gattatcaa 283
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 1 atggtaattgaaaataattcacaaaaaatatttcgaagtgtattttattttgattatcaa 60
Query: 284 aaactgaatttatcacttacttgccttttctaaaagtttaagaggttagacttctgtacg 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaactgaatttatcacttacttgccttttctaaaagtttaagaggttagacttctgtacg 120
Query: 344 tattatacctaagcttaattaaagtatagatttaattatgagaggactatcagaagatac 403
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattatacctaagcttaattaaagtatagatttaattatgagaggactatcagaagatac 180
Query: 404 accgccatcctctataaatggcgatgaaatcaccgggatggatgacgacgggatatattt 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accgccatcctctataaatggcgatgaaatcaccgggatggatgacgacgggatatattt 240
Query: 464 cgaggagatggaagaaatacaatttgatgatgaggaaatggttgatgaccaagaggagga 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgaggagatggaagaaatacaatttgatgatgaggaaatggttgatgaccaagaggagga 300
Query: 524 ggatacggaaatgattagaccagaagaccatgccattacagtgtttaacaaacataacgg 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggatacggaaatgattagaccagaagaccatgccattacagtgtttaacaaacataacgg 360
Query: 584 ttcagttttttgttgtgactttcatccaaatggtaagattgctgtaaccggtggggaaga 643
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcagtgttttgttgtgactttcatccaaatggtaagattgctgtaaccggtggggaaga 420
Query: 644 tgacaaagcatacgtgtggtctacagaaacaggggatgtattaatggattgcataggaca 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgacaaagcatacgtgtggtctacagaaacaggggatgtattaatggattgcataggaca 480
Query: 704 taaggattcagttatcttcgtcggattcagctttgatgggacctttctagctacagttga 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 taaggattcagttatcttcgtcggattcagctttgatgggacctttctagctacagttga 540
Query: 764 tatgtgcggattaataaaagtatggaaggttaatttggaagaaaatcaacaagaaccatg 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatgtgcggattaataaaagtatggaaggttaatttggaagaaaatcaacaagaaccatg 600
Query: 824 gtctgtggtatttgaatatgaggcggatgatctaagttggggttcatggcattttggagc 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtctgtggtatttgaatatgaggcggatgatctaagttggggttcatggcattttggagc 660
Query: 884 tagagtactcatatgcggggcagttacaggtgatatatacattttcaaaattccatctgg 943
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tagagtactcatatgtggggcagttacaggtgatatatacattttcaaaattccatctgg 720
Query: 944 agat 947
||||
Sbjct: 721 agat 724
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 244,669
Number of extensions: 5050
Number of successful extensions: 5050
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5049
Number of HSP's successfully gapped: 1
Length of query: 2089
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2072
Effective length of database: 8,119,229
Effective search space: 16823042488
Effective search space used: 16823042488
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)