BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02045 (UTR included)
(2392 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A2A11 1057 0.0
BF01003X1D07 250 9e-66
>BF01029A2A11
Length = 543
Score = 1057 bits (533), Expect = 0.0
Identities = 539/541 (99%)
Strand = Plus / Plus
Query: 623 tttcaaaaaaaactatgactatgacatagagcatacagacattgttgtaattggtggtgg 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttcaaaaaaaactatgactatgacatagagcatacagacattgttgtaattggtggtgg 60
Query: 683 tttcataggatcttctgtagcatactggttgaaaaccaaagcaggagaaggattatcagt 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttcataggatcttctgtagcatactggttgaaaaccaaagcaggagaaggattatcagt 120
Query: 743 agtggttttagataaagatcccatatacaaaaaatcaaaaaaaatatactcccatggagt 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtggttttagataaagatcccatatacaaaaaatcaaaaaaaatatactcccatggagt 180
Query: 803 tttaagtcaacactattccttactcgaaaatatttatctttcccaatatagtggagaatt 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttaagtcaacactattccttactcgaaaatatttatctttcccaatatagtggagaatt 240
Query: 863 tttaaggaatattaaggaacatttagttgaaggaattgacatacaattttatccccatgg 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttaaggaatattaaggaacatttagttgaaggaattgacatacaattttatccccatgg 300
Query: 923 ttatctaaccttagccagtgaaaagtatgtaaataaactagagaataacatgtcattact 982
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 301 ttatctaaccttagccagtgaaaagtatgcaaataaactagagaataacatgtcattact 360
Query: 983 taaagaatctggtataaacaataaacttctgacagttgaagaaatacaaagggcatatcc 1042
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 taaagaatctggtataaacaataaacttttgacagttgaagaaatacaaagggcatatcc 420
Query: 1043 atggattgatacaactggcattaaactcggctgtgtaagtacagagtcagaaggaatttt 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atggattgatacaactggcattaaactcggctgtgtaagtacagagtcagaaggaatttt 480
Query: 1103 tgatgccaacgccttgctcaatggctttatagttaaatccaaacaattgggtgcctgtta 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgatgccaacgccttgctcaatggctttatagttaaatccaaacaattgggtgcctgtta 540
Query: 1163 c 1163
|
Sbjct: 541 c 541
>BF01003X1D07
Length = 696
Score = 250 bits (126), Expect = 9e-66
Identities = 126/126 (100%)
Strand = Plus / Minus
Query: 2180 tcatggatgtgagtttttaattatgaattatttaaactgagctggaggagttgcaaaaag 2239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tcatggatgtgagtttttaattatgaattatttaaactgagctggaggagttgcaaaaag 637
Query: 2240 ggctccgccttgttgagatgctgcacgagaaggtgcaaatccaagtagcttctgaatatt 2299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ggctccgccttgttgagatgctgcacgagaaggtgcaaatccaagtagcttctgaatatt 577
Query: 2300 ttgcct 2305
||||||
Sbjct: 576 ttgcct 571
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 414,167
Number of extensions: 14082
Number of successful extensions: 14082
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 14082
Number of HSP's successfully gapped: 2
Length of query: 2392
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2375
Effective length of database: 8,119,229
Effective search space: 19283168875
Effective search space used: 19283168875
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)