BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02061 (UTR included)
(1561 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B2H04 1294 0.0
BF01019A1H08 84 8e-16
>BF01022B2H04
Length = 669
Score = 1294 bits (653), Expect = 0.0
Identities = 665/669 (99%)
Strand = Plus / Plus
Query: 443 acatatgttataattattattaattagcaacggttaatgacaagcaaatcaaaaaaagat 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatatgttataattattattaattagcaacggttaatgacaagcaaatcaaaaaaagat 60
Query: 503 ggggagtcctgagagagaattgtgccctccaccttcggaagaagacgaacttactttacc 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggggagtcctgagagagaattgtgccctccaccttcggaagaagacgaacttactttacc 120
Query: 563 tagagcaagtataaacaagatgattaaagaattagtaccttctgtacgcgtagcgtttga 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagagcaagtataaacaagatgattaaagaattagtaccttctgtacgcgtagcgtttga 180
Query: 623 atcaagagaattgattcttaattgctgtacagaattcattcatcttatcagttcagaagc 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcaagagaattgattcttaattgctgtacagaattcattcatcttatcagttcagaagc 240
Query: 683 caatgaagtttgtaatcaaagtaacaagaaaacgattaatgctgaacatgttcttatggc 742
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 241 caatgaagtttgtaatcaaagtaacaagaaaacgattaatgttgaacatgttcttatggc 300
Query: 743 tttggatagattaggatttagtgattatacagttgaagccgaggcggtccttaaagattg 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttggatagattaggatttagtgattatacagttgaagccgaggcggtccttaaagattg 360
Query: 803 taaagcagtggctgcaaagcgaagaagacaaagtactagattagaaaatcttggtatccc 862
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taaagcagtagctgcaaagcgaagaagacaaagtactagattagaaaatcttggtatccc 420
Query: 863 agaagaagagctatttagacaacaacaagaattgtttgcaaaggctagagaagaacaagc 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agaagaagagctatttagacaacaacaagaattgtttgcaaaggctagagaagaacaagc 480
Query: 923 aaagcaggaacagcagcagtggttattactgcagcaacaaggtcttgccggtgctgatgg 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaagcaggaacagcagcagtggttattactgcagcaacaaggtcttgccggtgctgatgg 540
Query: 983 aatgcctcagtcctacataccgccaccatctggtctgaaacaggagtcacaagaagatga 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatgcctcagtcctacataccgccaccatctggtctgaaacaggagtcacaagaagatga 600
Query: 1043 tgatgatgattattcctaataaaccaattgtgattaacccattgtcataaaaaattaata 1102
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 601 tgatgatgactattcctaataaaccaattgtgattaacccattgtcattaaaaattaata 660
Query: 1103 tactttgaa 1111
|||||||||
Sbjct: 661 tactttgaa 669
>BF01019A1H08
Length = 504
Score = 83.8 bits (42), Expect = 8e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 1496 gagacgaaacctctttgtatccaatggatttaccgtgcggatgccgggtccatcgcgttg 1555
|||| |||||||||| | || ||||||||| ||||||||| |||||||||||||||||||
Sbjct: 364 gagatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttg 423
Query: 1556 caggga 1561
||||||
Sbjct: 424 caggga 429
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 265,496
Number of extensions: 6979
Number of successful extensions: 6979
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6977
Number of HSP's successfully gapped: 2
Length of query: 1561
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1544
Effective length of database: 8,119,229
Effective search space: 12536089576
Effective search space used: 12536089576
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)