BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02068 (UTR included)
(2176 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025A2C12 1429 0.0
>BF01025A2C12
Length = 733
Score = 1429 bits (721), Expect = 0.0
Identities = 730/733 (99%)
Strand = Plus / Plus
Query: 422 gtgaaacgttaagtttgtgtacatatcattttagtttattaagataaataagttttaact 481
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gtgaaacgttaagtttgtgtacatatcattttagtttattaagataaataagttttaatt 60
Query: 482 tttaccataaggcaataaaatgagtgatgtaggagataaaacatctgaagtggctgaagc 541
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 tttaccataaggcaataaaatgagtgatctaggagataaaacatctgaagtggctgaagc 120
Query: 542 aaatggaaatgtgaataatgataaatcaaggaaaagttgggtcaagttcgatgaagagag 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatggaaatgtgaataatgataaatcaaggaaaagttgggtcaagttcgatgaagagag 180
Query: 602 tcctcaaacaagtgtattacatttagaaccacagcccttgaatgaaagtgcaaaatcagg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcctcaaacaagtgtattacatttagaaccacagcccttgaatgaaagtgcaaaatcagg 240
Query: 662 tactactttacacagctctgaagtacctgctgttttgaaaacagagtcggtacacgtaaa 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tactactttacacagctctgaagtacctgctgttttgaaaacagagtcggtacacgtaaa 300
Query: 722 tttggaacgcgaaaaatctgtcgaacctgtgtctcaaagttctgtgatgaaaaatgtgga 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttggaacgcgaaaaatctgtcgaacctgtgtctcaaagttctgtgatgaaaaatgtgga 360
Query: 782 atatattaatgtacgccatggatttaaaaatggtgacataattgtgaccttgttacctac 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atatattaatgtacgccatggatttaaaaatggtgacataattgtgaccttgttacctac 420
Query: 842 aaacactaattggccatggataacggccgcacgatttcgtccagagctagtcccagaaga 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaacactaattggccatggataacggccgcacgatttcgtccagagctagtcccagaaga 480
Query: 902 attgatggcacaaggattaactcttacagttgaagagtatgtccatgctatggaacttct 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attgatggcacaaggattaactcttacagttgaagagtatgtccatgctatggaacttct 540
Query: 962 tgtaaatgatgctcgctttacattatacaacatttgttacaaaagagttttagtttgctg 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtaaatgatgctcgctttacattatacaacatttgttacaaaagagttttagtttgctg 600
Query: 1022 gataactattgccttccttgttcttcttacacttctattctctggcttaacaggactttt 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gataactattgccttccttgttcttcttacacttctattctctggcttaacaggactttt 660
Query: 1082 attattatcacttggagttttgtggttggtgctaaatgcattagcaatattcttgtgtat 1141
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 661 attattatcacttggagttttgtggttggtgctaaatgcatcagcaatattcttgtgtat 720
Query: 1142 gtggataaaactc 1154
|||||||||||||
Sbjct: 721 gtggataaaactc 733
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 290,395
Number of extensions: 6309
Number of successful extensions: 6309
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6309
Number of HSP's successfully gapped: 1
Length of query: 2176
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2159
Effective length of database: 8,119,229
Effective search space: 17529415411
Effective search space used: 17529415411
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)