BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02081 (UTR included)
(1264 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 113 7e-25
BF14_335_C2 90 1e-17
BF01049B1F01 86 2e-16
BF14_335_C4 82 2e-15
BF01044B1A07 76 2e-13
BF01016A2B02 76 2e-13
BF01014B2F02 76 2e-13
BF01056B2D01 68 4e-11
>BF01019A1H08
Length = 504
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 527 acacctgggtcgcaagtcccaggcattgttgaagctcctgtccctgcaacgcgatggacc 586
||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 469 acacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgcgatggacc 410
Query: 587 cggcacccg 595
|||||||||
Sbjct: 409 cggcacccg 401
>BF14_335_C2
Length = 1827
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 527 acacctgggtcgcaagtcccaggcattgttgaagctcctgtccctgcaacgcgatggacc 586
||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||| |||||
Sbjct: 913 acacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacgcggcggacc 854
Query: 587 cggcacccg 595
|||||||||
Sbjct: 853 cggcacccg 845
>BF01049B1F01
Length = 840
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 527 acacctgggtcgcaagtcccaggcattgttgaagctcctgtccctgcaacg 577
||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 637 acacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 587
>BF14_335_C4
Length = 1491
Score = 81.8 bits (41), Expect = 2e-15
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 527 acacctgggtcgcaagtcccaggcattgttgaagctcctgtccctgcaacgcgatgg 583
||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||
Sbjct: 1260 acacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaacgcgatgg 1315
>BF01044B1A07
Length = 806
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 526 cacacctgggtcgcaagtcccaggcattgttgaagctcctgtccctgcaacgcgatggac 585
||||||||| |||| |||||||| || |||||||||||| ||||||| |||||||||||
Sbjct: 533 cacacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggac 474
Query: 586 ccggcacccg 595
||| ||||||
Sbjct: 473 ccgccacccg 464
>BF01016A2B02
Length = 780
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 527 acacctgggtcgcaagtcccaggcattgttgaagctcctgtccctgcaacgcgatggacc 586
||||||| ||||||| ||||||||| ||||||||||||| ||||| ||||||| |||||
Sbjct: 274 acacctgagtcgcaattcccaggcactgttgaagctcctctcccttcaacgcgcgggacc 215
Query: 587 cggcac 592
||||||
Sbjct: 214 cggcac 209
>BF01014B2F02
Length = 623
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/69 (89%), Gaps = 2/69 (2%)
Strand = Plus / Minus
Query: 527 acacctgggtcgcaagtcccaggcattgttgaagctcctgtccctgcaacgcgatggacc 586
||||||||||||||||||| |||| || |||||||||| |||||||||||| ||||||
Sbjct: 622 acacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggacc 565
Query: 587 cggcacccg 595
|||||||||
Sbjct: 564 cggcacccg 556
>BF01056B2D01
Length = 728
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 542 gtcccaggcattgttgaagctcctgtccctgcaacgcgatggacccggcacccg 595
||||||||| ||||||||||||| ||||||||| | |||||||||||||||||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccg 113
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 193,378
Number of extensions: 4106
Number of successful extensions: 4106
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 4104
Number of HSP's successfully gapped: 8
Length of query: 1264
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1247
Effective length of database: 8,119,229
Effective search space: 10124678563
Effective search space used: 10124678563
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)