BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02082 (UTR included)
(2626 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048A2G07 1453 0.0
>BF01048A2G07
Length = 773
Score = 1453 bits (733), Expect = 0.0
Identities = 763/773 (98%)
Strand = Plus / Plus
Query: 717 gaggagcatgtacgatgctctcagagattctctaccacttggataaacggccaggaagac 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggagcatgtacgatgctctcagagattctctaccacttggataaacggccaggaagac 60
Query: 777 tgtctcactctcaacgtatatactccgataccatatgtgacaacagagaaactgctgcca 836
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtctcactctgaacgtctatactccgataccatatgtgacaacagagaaactgctgcca 120
Query: 837 gttatggttttcattcacggaggaggatacagagatggttccggctctccttttctttat 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttatggttttcattcacggaggaggatacagagatggttccggctctccttttctttat 180
Query: 897 ggacctgattatttaatacgtcacggagtggtactagtcacttttaactatagacttgaa 956
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 ggacctgattatttaatacgtcacggagttgtactagtcacttttaactatagacttgaa 240
Query: 957 gtattgggcttcctgtgcttgggtataaaagacgcacctggtaacatgggtctaaaagat 1016
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 241 gtattgggcttcctgtgcttgggtataaaagacgcaccgggtaacatgggtctgaaagat 300
Query: 1017 caggtgcaagccctgcgctgggttaaggaaaatataagagcttttggaggagatcccaat 1076
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 caggtgcaagccctgcgctgggttaagaaaaatataagagcttttggaggagatcccaat 360
Query: 1077 caagtgacactgtttggagagagtgccggctcagcttccgtactatatcatattgtctct 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caagtgacactgtttggagagagtgccggctcagcttccgtactatatcatattgtctct 420
Query: 1137 cctttgtctacaggattatttcacagagcaataatgcaaagcggttccgccatttcaccc 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctttgtctacaggattatttcacagagcaataatgcaaagcggttccgccatttcaccc 480
Query: 1197 tggagtttacaattcgagccatttaaaacggcttcatatttagctcatcaaattggatat 1256
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 481 tggagtttacaattcgagccatttaaaacggcttcatatttagttcatcaaattggatat 540
Query: 1257 aaattagaagatcctacagaaattcttaaattactatcaaaaatatccgtcaaagaatta 1316
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 541 aaattagaagatcctacagaaattcttaaattactatcaaaattgtccgtcaaagaatta 600
Query: 1317 ctatccactcgtattcccagagcgaagggtgacgtcatattgtcagaaaatatatttgtc 1376
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctatccactcgtgttcccagagcgaagggtgacgtcatattgtcagaaaatatatttgtc 660
Query: 1377 ccgtgtattgaaaaaaataatctcgatgaagaaaaattcctaaccgattccccgtataat 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccgtgtattgaaaaaaataatctcgatgaagaaaaattcctaaccgattccccgtataat 720
Query: 1437 ttaatttcgaaaggtcaatttaacaaagttccaataataatgggttataacaa 1489
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttaatttcgaaaggtcaatttaacaaagttccaataataatgggttataacaa 773
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 367,373
Number of extensions: 7889
Number of successful extensions: 7889
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7889
Number of HSP's successfully gapped: 1
Length of query: 2626
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2609
Effective length of database: 8,119,229
Effective search space: 21183068461
Effective search space used: 21183068461
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)