BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02086 (UTR included)
(4312 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2216_C1 1413 0.0
>BF14_2216_C1
Length = 722
Score = 1413 bits (713), Expect = 0.0
Identities = 719/721 (99%)
Strand = Plus / Plus
Query: 2331 cttacatataacacaacccttgatgttaaaagtgcctctatgacaattgcaacaaataca 2390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cttacatataacacaacccttgatgttaaaagtgcctctatgacaattgcaacaaataca 61
Query: 2391 gaaactattgacataaatataacggatgaaggcagtactacactgaaactgatcagagga 2450
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 62 gaaactattgacataaatataacggatgaaggcagtactacactgaaactgatcggagga 121
Query: 2451 gaagttaaaaggtttctgtgtcaatttaaagccagtccacatgataatggatcggaaatg 2510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaagttaaaaggtttctgtgtcaatttaaagccagtccacatgataatggatcggaaatg 181
Query: 2511 aaaatcaaaaatgtatcatttgtattggacagtgacaggagaaaaattataatgaacttt 2570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaaatcaaaaatgtatcatttgtattggacagtgacaggagaaaaattataatgaacttt 241
Query: 2571 aaaatcgatgaaatcaagaatgtagagcccacagtccatcctgaattactacacttcata 2630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaaatcgatgaaatcaagaatgtagagcccacagtccatcctgaattactacacttcata 301
Query: 2631 atgagtcctaaaagtgactatgaatttgattgtataatgcctttgaccactacatccatc 2690
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atgagtcctaaaactgactatgaatttgattgtataatgcctttgaccactacatccatc 361
Query: 2691 accagcagggaatgtagactgtctttagatattaaaaatgcagtgccggctttacaaggc 2750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 accagcagggaatgtagactgtctttagatattaaaaatgcagtgccggctttacaaggc 421
Query: 2751 gagtggtttcccaccactttcacagtaataaaccatgaagacggtcccgttcatgatatg 2810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gagtggtttcccaccactttcacagtaataaaccatgaagacggtcccgttcatgatatg 481
Query: 2811 tcaatagtgctgacacttctaagctctcctgataatccaaaccctgaatcggtcacagag 2870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcaatagtgctgacacttctaagctctcctgataatccaaaccctgaatcggtcacagag 541
Query: 2871 ttgggctttagacacggtgaacccgaagcccaacccattaaactctgtgtcggagatgtg 2930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttgggctttagacacggtgaacccgaagcccaacccattaaactctgtgtcggagatgtg 601
Query: 2931 aataaaagttcttcatattcaaacacattttatttaaaaactaacagaacagccacaaca 2990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aataaaagttcttcatattcaaacacattttatttaaaaactaacagaacagccacaaca 661
Query: 2991 actgttcaaataaaagtaacgtacacagtagatgcttatgaaacacctcaacttgaatgt 3050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 actgttcaaataaaagtaacgtacacagtagatgcttatgaaacacctcaacttgaatgt 721
Query: 3051 t 3051
|
Sbjct: 722 t 722
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 524,261
Number of extensions: 11408
Number of successful extensions: 11408
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11408
Number of HSP's successfully gapped: 1
Length of query: 4312
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4294
Effective length of database: 8,109,745
Effective search space: 34823245030
Effective search space used: 34823245030
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)