BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02096 (UTR included)
(3451 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3267_C1 1643 0.0
>BF14_3267_C1
Length = 872
Score = 1643 bits (829), Expect = 0.0
Identities = 850/857 (99%)
Strand = Plus / Plus
Query: 2257 ccatgaccgaggccaggaaactcccctgcaaacatctcttccacaactcgtgcctgtgtc 2316
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 16 ccatgacggaggccaggaaactcccgtgcaaacatctcttccacaactcgtgcctgtgtc 75
Query: 2317 gctgggtgcagcaggacgcgtcctgtcccacgtgccggcgctcgctgcaggctcggcccg 2376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gctgggtgcagcaggacgcgtcctgtcccacgtgccggcgctcgctgcaggctcggcccg 135
Query: 2377 caccctcgcccgccgcaccccacgcacccctcgcgcccctcacgcccgccgccaccatgg 2436
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 136 caccctcgcccgccgcacccctcgcacccctcgcgcccctcacgcccgccgccaccatgg 195
Query: 2437 gactcgacgccacacacaaccatctgttccactttgacggctcccggtacgtgtcgtggc 2496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gactcgacgccacacacaaccatctgttccactttgacggctcccggtacgtgtcgtggc 255
Query: 2497 tgccgagcttctcggtggaggtgacgcgggtcagggacgcgccgcctcttgacgatatgg 2556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tgccgagcttctcggtggaggtgacgcgggtcagggacgcgccgcctcttgacgatatgg 315
Query: 2557 tggaccaggtgttggcagtgttccctcagtacggtcgcgaggccgtgatggcggacctgg 2616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tggaccaggtgttggcagtgttccctcagtacggtcgcgaggccgtgatggcggacctgg 375
Query: 2617 ctcgctcgcgctcgccggacgtcaccgtacacaacatactggagggcagactgccgccgc 2676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctcgctcgcgctcgccggacgtcaccgtacacaacatactggagggcagactgccgccgc 435
Query: 2677 ccccgcccccgccctcgccctcgccaccccccgcacacgccccgcccgtcccgctggcga 2736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ccccgcccccgccctcgccctcgccaccccccgcacacgccccgcccgtcccgctggcga 495
Query: 2737 cccccgccatcgtggcccccatacagacgcacaccccgcacgtcggataccacagcacgg 2796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cccccgccatcgtggcccccatacagacgcacaccccgcacgtcggataccacagcacgg 555
Query: 2797 aggggttctcctcggtagcggcggagagagaggacacgctgcggagacggaaggaggcgc 2856
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aggggttctcatcggtggcggcggagagagaggacacgctgcggagacggaaggaggcgc 615
Query: 2857 tgctggcggtggccaggaggagatacctggacaggcgggcggcggccggcgcggggggcg 2916
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tgctggcggcggccaggaggagatacctggacaggcgggcggcggccggcgcggggggcg 675
Query: 2917 cggggggcgggcggcccgcacacaccgccagctgagtgttccgacacgtcctcacgcgcc 2976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cggggggcgggcggcccgcacacaccgccagctgagtgttccgacacgtcctcacgcgcc 735
Query: 2977 tcgcacacacacacgcggccggcgcccggcacctacaccgctccggcttgacgtaaccca 3036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tcgcacacacacacgcggccggcgcccggcacctacaccgctccggcttgacgtaaccca 795
Query: 3037 gactatatgtgtggaggagggccgcgccccactcaggacgctagttcactgtgttatacc 3096
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gactatatgtgtggaggagggccgcgccccactcaggacgctagttcactgtgttataca 855
Query: 3097 gacgtcgccccgcgctc 3113
|||||||||||||||||
Sbjct: 856 gacgtcgccccgcgctc 872
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 311,487
Number of extensions: 7140
Number of successful extensions: 7140
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7135
Number of HSP's successfully gapped: 1
Length of query: 3451
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3433
Effective length of database: 8,109,745
Effective search space: 27840754585
Effective search space used: 27840754585
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)