BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02105 (UTR included)
(1528 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A2F06 1233 0.0
>BF01060A2F06
Length = 638
Score = 1233 bits (622), Expect = 0.0
Identities = 634/638 (99%)
Strand = Plus / Plus
Query: 15 cagccgaccgtctaccgccgtcgagtgctctgtgcagtgattgcgaactttaacgttttg 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagccgaccgtctaccgccgtcgagtgctctgtgcagtgattgcgaactttaacgttttg 60
Query: 75 agtgatgacaacgagctccagagacttctgagagaaagggtcggcgtgcagggcggcgcg 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtgatgacaacgagctccagagacttctgagagaaagggtcggcgtgcagggcggcgcg 120
Query: 135 acaacgcgcacgcgcccgcggccacgagtcgccgcgacccgcacacgcgtccagaccggc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acaacgcgcacgcgcccgcggccacgagtcgccgcgacccgcacacgcgtccagaccggc 180
Query: 195 cagtggccagcggccaccctcaagacagccatggacgacaagcagcccgccggcgaggag 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagtggccagcggccaccctcaagacagccatggacgacaagcagcccgccggcgaggag 240
Query: 255 cactacagtctgcgctggaacaaccaccaggcacatctgctccgctccttcgaggcactg 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cactacagtctgcgctggaacaaccaccaggcacatctgctccgctccttcgaggcactg 300
Query: 315 ctgcacgcagaaacactggtcgacgtcaccctcgtgtgcgccgagaggagagtgcgcgcc 374
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgcacgcagaaacattggtcgacgtcaccctcgtgtgcgccgagaggagagtgcgcgcc 360
Query: 375 cacaaggtgctgttaggagcgtgcagccctctcttcaggaggatatttagcgagaacccg 434
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 cacaaggtgctgttaggagcgtgcagcccgctcttcaggaggatatttagcgagaacccg 420
Query: 435 tgcaaacacccggtgatcgtgctcaaagactttcaaggatgggaggtgcaagcggttgta 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcaaacacccggtgatcgtgctcaaagactttcaaggatgggaggtgcaagcggttgta 480
Query: 495 gacttcatgtaccgcggagaggtttccgtagcgcaggagcagctggagacggtaattcgc 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gacttcatgtaccgcggagaggtttccgtagcgcaggagcagctggagacggtaattcgc 540
Query: 555 gcgggagagtcgctgcaggtccgcggtctggccgaccaggaggctgccgagtgcggggag 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcgggagagtcgctgcaggtccgcggtctggccgaccaggaggctgccgagtgcggggag 600
Query: 615 tcggagaggtcgccggttggaagccctccgactgggac 652
||||||||||||||||| ||||||||||| ||||||||
Sbjct: 601 tcggagaggtcgccggtcggaagccctccaactgggac 638
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 148,617
Number of extensions: 3227
Number of successful extensions: 3227
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3227
Number of HSP's successfully gapped: 1
Length of query: 1528
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1511
Effective length of database: 8,119,229
Effective search space: 12268155019
Effective search space used: 12268155019
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)