BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02112 (UTR included)
(1837 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015A2D10 563 e-160
>BF01015A2D10
Length = 576
Score = 563 bits (284), Expect = e-160
Identities = 302/308 (98%), Gaps = 2/308 (0%)
Strand = Plus / Plus
Query: 479 aggttttcctctaaacaaaa--aaatgcgtttgataatcttggacgacacagcggccgta 536
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aggttttcctctaaacaaaaaaaaatgcgtttgataatcttggacgacacagcggccgta 328
Query: 537 gcggactgggcggctcggttcgtcctccagcgagtgaccgagttcgcgccgtcagcggag 596
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gcggactgggccgctcggttcgtcctccagcgagtgaccgagttcgcgccgtcagcggag 388
Query: 597 cgccggttcgtgctagggctccccacgggtggaactccgctgggaatgtacaaacgactc 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cgccggttcgtgctagggctccccacgggtggaactccgctgggaatgtacaaacgactc 448
Query: 657 atacagttttacaaggagggacgcatctcgttcaaatacgtcactaccttcaacatggac 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atacagttttacaaggagggacgcatctcgttcaaatacgtcactaccttcaacatggac 508
Query: 717 gaatacgtcggtctgcctcgcgaccacccggagtcctatcactactacatgtggaacgag 776
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaatacgtcgnnntgcctcgcgaccacccggagtcctatcactactacatgtggaacgag 568
Query: 777 ttcttcaa 784
||||||||
Sbjct: 569 ttcttcaa 576
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 267,534
Number of extensions: 19627
Number of successful extensions: 19627
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 19626
Number of HSP's successfully gapped: 1
Length of query: 1837
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1820
Effective length of database: 8,119,229
Effective search space: 14776996780
Effective search space used: 14776996780
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)