BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02113 (UTR included)
(1699 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1588_C1 1207 0.0
>BF14_1588_C1
Length = 870
Score = 1207 bits (609), Expect = 0.0
Identities = 630/637 (98%)
Strand = Plus / Plus
Query: 475 agagacagtgcttttgagtaagaaacatggagtggctgtttggacacagaatgactccag 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 agagacagtgcttttgagtaagaaacatggagtggctgtttggacacagaatgactccag 293
Query: 535 aggagatgctgaggaagaatcagcgtgctctcaacaaggccatgagagacttggacaggg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aggagatgctgaggaagaatcagcgtgctctcaacaaggccatgagagacttggacaggg 353
Query: 595 agaggctcaagatggaacaacaggagaaaaaagttatagcggacataaagaaattagcca 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 agaggctcaagatggaacaacaggagaaaaaagttatagcggacataaagaaattagcca 413
Query: 655 aggacggacagatggatgccgttaaaataatggcaaaggatttggtgcgcacgcgccgct 714
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aggatggccagatggatgccgttaaaataatggcaaaggatttggtgcgcacgcgccgct 473
Query: 715 acgtgcgcaagtttatgttgatgaaagcaaacatccaggctgttgcacttaaaatacaaa 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 acgtgcgcaagtttatgttgatgaaagcaaacatccaggctgttgcacttaaaatacaaa 533
Query: 775 cactcaaatctcagagtagtatggcccaggccatgagaggggtgacgcgtgccatggcgt 834
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 534 cactcaagtctcagagtagtatggcccaggccatgagaggggtgacgcgtgccatggcct 593
Query: 835 ctatgaacagacaactcaatgtaccacagatacaaaagatattacaggagtttgagaagc 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ctatgaacagacaactcaatgtaccacagatacaaaagatattacaggagtttgagaagc 653
Query: 895 agtcggagattatggatatgaaggaggaattgatgaatgactccattgatgaagccatgg 954
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 654 agtcggagattatggatatgaaggaggaattgatgaatgactccatcgatgaagccatgg 713
Query: 955 aggcagatgatgatgaagaggagagtgatgcagttgtgtctcagatcctggatgagctgg 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 aggcagatgatgatgaagaggagagtgatgcagttgtgtctcagatcctggatgagctgg 773
Query: 1015 gtctccagctcaatgaccagctgtcggggttgccgcaagccactggctcactgtctatat 1074
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 774 gtctccagctcaatgaccagctgtcagggttgccgcaagccactggctcactgtctatat 833
Query: 1075 cagccaagaccccggcggcggcggtagcggcgggcgg 1111
||||||||||||||||||||||||| |||||||||||
Sbjct: 834 cagccaagaccccggcggcggcggtggcggcgggcgg 870
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 260,487
Number of extensions: 6507
Number of successful extensions: 6507
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6505
Number of HSP's successfully gapped: 1
Length of query: 1699
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1682
Effective length of database: 8,119,229
Effective search space: 13656543178
Effective search space used: 13656543178
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)