BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02118 (UTR included)
(2260 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B2A07 157 9e-38
BF14_335_C2 141 6e-33
BF01019A1H08 133 1e-30
BF14_335_C4 111 5e-24
BF01047B2H03 86 3e-16
BF01049B1F01 80 2e-14
BF01014B2F02 74 1e-12
BF01044B1A07 68 7e-11
BF14_335_C5 68 7e-11
>BF01028B2A07
Length = 531
Score = 157 bits (79), Expect = 9e-38
Identities = 193/229 (84%), Gaps = 4/229 (1%)
Strand = Plus / Plus
Query: 843 gtagtggacgtaagaggttctggtccagatgactgtgctgacacgttcgtatatgtggct 902
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gtagtggatgtaagaggttctggtccagatgactgtgctgacacgttcgtatatgtggct 231
Query: 903 ctacacaggccgaaacctga--actagtagtcgacatcgctagagatcgttcttggagag 960
| ||| || ||||||||||||| ||||||||||||||||||||||||
Sbjct: 232 gatgt--gtccggctttggactactagtagtcgacgtcgctagagatcgttcttggagag 289
Query: 961 tcactcatcgatacttcttcccatatccctcacgcggtctttttattattgacggtgaaa 1020
|||||||||||||||||||||||||||| || | ||| | ||||| ||| ||||| ||||
Sbjct: 290 tcactcatcgatacttcttcccatatccttcccacggccgttttactatcgacggagaaa 349
Query: 1021 gtttcgacatcatggacggtgttttgggcatggctctatcaccatatat 1069
||||||| ||||||| || || | || ||||| |||||||| |||||
Sbjct: 350 gtttcgatctcatggatggcgtccttgggatggcgctatcaccttatat 398
>BF14_335_C2
Length = 1827
Score = 141 bits (71), Expect = 6e-33
Identities = 240/293 (81%), Gaps = 10/293 (3%)
Strand = Plus / Minus
Query: 1651 ctaaatctctttacaacctactaaaagacttggacttgtcgagaattaacatcaattcac 1710
|||||||||| |||| |||||||||| |||||| | |||| |||| ||||| || ||||
Sbjct: 1093 ctaaatctctctacagcctactaaaatacttgggcctgtccagaactaacaccagttcat 1034
Query: 1711 tcttagaacttacttcaaaggcagccctagtaggttcatttcaaatgt-------agaaa 1763
|||| |||| |||||| ||| |||| ||||||||||| |||||||| | ||| |
Sbjct: 1033 tcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaatttggttaggagaga 974
Query: 1764 ggagcttgaccggtggagacaagcgtt-tg-atgcgcgttagattgggaccgcttaaacc 1821
|||||||| |||||||| |||||| || | ||| ||||||| ||| | ||||||||
Sbjct: 973 ggagcttggacggtggaggtgagcgttatgtacgcgagttagataggggct-cttaaacc 915
Query: 1822 tacacctgggtcgcaagtcccaggcactgttagagctccagtccctgcaacgcaatagaa 1881
|||||||| ||||||| |||||||||||||| |||||| |||||||||||| ||
Sbjct: 914 tacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacgcggcggac 855
Query: 1882 ccggcatccgcacggtgaatccatggaatgctaagaagtttcgtctctttata 1934
|||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||
Sbjct: 854 ccggcacccgcacggtgaatccatagaaagctaagaggtttcgtctctttata 802
>BF01019A1H08
Length = 504
Score = 133 bits (67), Expect = 1e-30
Identities = 103/115 (89%)
Strand = Plus / Minus
Query: 1814 cttaaacctacacctgggtcgcaagtcccaggcactgttagagctccagtccctgcaacg 1873
|||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||
Sbjct: 478 cttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacg 419
Query: 1874 caatagaaccggcatccgcacggtgaatccatggaatgctaagaagtttcgtctc 1928
| || || |||||| ||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 418 cgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcatctc 364
>BF14_335_C4
Length = 1491
Score = 111 bits (56), Expect = 5e-24
Identities = 123/144 (85%), Gaps = 1/144 (0%)
Strand = Plus / Plus
Query: 1785 agcgtttgatgcgcgttagattgggaccgcttaaacctacacctgggtcgcaagtcccag 1844
||||||| |||||||| |||| | || |||||||||||||||||||||||||||||||
Sbjct: 1222 agcgtttaatgcgcgtaagataaaggccccttaaacctacacctgggtcgcaagtcccag 1281
Query: 1845 gcactgttagagctccagtccctgcaacgcaatagaaccggcatccgcacggtgaatcca 1904
|||||||| |||||| | |||||||||| || | || ||| ||||||||||||||||
Sbjct: 1282 gcactgttgaagctcctct-cctgcaacgcgatggtccccgcaaccgcacggtgaatcca 1340
Query: 1905 tggaatgctaagaagtttcgtctc 1928
||||||||| ||| |||||||||
Sbjct: 1341 tggaatgctgagagttttcgtctc 1364
>BF01047B2H03
Length = 758
Score = 85.7 bits (43), Expect = 3e-16
Identities = 201/251 (80%), Gaps = 2/251 (0%)
Strand = Plus / Minus
Query: 114 aggcagctggaactgctaagcatttgctggtgggatgtagggtactcctgtatagcggtc 173
|||||| ||||| |||| ||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 345 aggcagttggaattgctgagcatttgctgatgggatgtaggctactcctggatagcggtc 286
Query: 174 aatact-cgcatcgtcacgatagggttcttaaaatcatgcgtgaagcggttagtttctcg 232
|||||| | || || ||||||||| | || |||| | ||||||||||||| | | |
Sbjct: 285 aatactaccggtctccatgatagggttttaaatttcatacatgaagcggttagtattttg 226
Query: 233 gtagccagaccgccaagggaaataaccacaaacgagagatcagtatgttttgtgagagaa 292
|||| || || || |||||||||||||||| | ||| | | ||||||||||||||
Sbjct: 225 gtagtcattgcggaaaaagaaataaccacaaacgggcgattaattggttttgtgagagaa 166
Query: 293 ggcacagtggctataaaatc-aatgccaagccttactctatccttaaagcgacttcggaa 351
| || ||||||||| || || ||||||||||||||||||||||||| ||||||
Sbjct: 165 gacattagggctataaagtcaaacatcaagccttactctatccttaaagcggtttcggat 106
Query: 352 tggactataat 362
|| ||||||||
Sbjct: 105 tgcactataat 95
>BF01049B1F01
Length = 840
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 1814 cttaaacctacacctgggtcgcaagtcccaggcactgttagagctccagtccctgcaacg 1873
|||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 646 cttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaacg 587
>BF01014B2F02
Length = 623
Score = 73.8 bits (37), Expect = 1e-12
Identities = 91/108 (84%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 1822 tacacctgggtcgcaagtcccaggcactgttagagctccagtccctgcaacgcaatagaa 1881
|||||||||||||||||||| |||| ||| | |||||| |||||||||||| | ||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggac 566
Query: 1882 ccggcatccgcacggtgaatccatggaatgctaagaagtttcgtctct 1929
|||||| |||||||||| ||||| ||||||| ||| |||||||||||
Sbjct: 565 ccggcacccgcacggtgcatccactgaatgctgagaggtttcgtctct 518
>BF01044B1A07
Length = 806
Score = 67.9 bits (34), Expect = 7e-11
Identities = 85/102 (83%)
Strand = Plus / Minus
Query: 1823 acacctgggtcgcaagtcccaggcactgttagagctccagtccctgcaacgcaatagaac 1882
|||||||| |||| |||||||| ||| ||| |||||| ||||||| |||| || || |
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 1883 cggcatccgcacggtgaatccatggaatgctaagaagtttcg 1924
|| || ||||||||||||||||| ||| ||| ||||||||||
Sbjct: 472 cgccacccgcacggtgaatccattgaacgctgagaagtttcg 431
>BF14_335_C5
Length = 1597
Score = 67.9 bits (34), Expect = 7e-11
Identities = 119/148 (80%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 1763 aggagcttgaccggtggagacaagcgtttgatgcgcgttagattgggaccgcttaaacct 1822
||||||||| |||||||| ||||||| |||||||||||| ||| | |||||||||
Sbjct: 1448 aggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcgccttaaacct 1507
Query: 1823 acacctgggtcgcaagtcccaggcactgttagagctccagtccctgcaacgcaatagaac 1882
|||| ||||||||||||||||||||| |||||| ||| ||||| | || | |
Sbjct: 1508 acacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaaag--atgcacc 1565
Query: 1883 cggcatccgcacggtgaatccatggaat 1910
||||| |||||||||||||||| |||||
Sbjct: 1566 cggcacccgcacggtgaatccacggaat 1593
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 247,343
Number of extensions: 5026
Number of successful extensions: 5026
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 5023
Number of HSP's successfully gapped: 11
Length of query: 2260
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2243
Effective length of database: 8,119,229
Effective search space: 18211430647
Effective search space used: 18211430647
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)