BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02132 (UTR included)
(3079 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3048_C1 2331 0.0
>BF14_3048_C1
Length = 1212
Score = 2331 bits (1176), Expect = 0.0
Identities = 1203/1212 (99%), Gaps = 1/1212 (0%)
Strand = Plus / Plus
Query: 1322 tgcaatggcagaagtattcaatttagacgaaaaaagaaattaccaggagctcatcaggag 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcaatggcagaagtattcaatttagacgaaaaaagaaattaccaggagctcatcaggag 60
Query: 1382 agtgactggaaatataaaaccatcgtcgataggcaaacctttggatatcaagaacttggc 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtgactggaaatataaaaccatcgtcgataggcaaacctttggatatcaagaacttggc 120
Query: 1442 agatgagtccgctgctttcagatcaactctcaggtcacagaagagtgcgttaaatgaatt 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatgagtccgctgctttcagatcaactctcaggtcacagaagagtgcgttaaatgaatt 180
Query: 1502 gaaactggtggaacaaggactcagtagcattaaagacaatgaatccactcaagaatatga 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaactggtggaacaaggactcagtagcattaaagacaatgaatccactcaagaatatga 240
Query: 1562 tcccatcacggtagcatccatcaactcctccgactcagaagtggaaatcatcacatcgga 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcccatcacggtagcatccatcaactcctccgactcagaagtggaaatcatcacatcgga 300
Query: 1622 tgcttctacatcatcatccgtcaaaatcgatcccatcaatacactcaaagattcgtacag 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcttctacatcatcatccgtcaaaatcgatcccatcaatacactcaaagattcgtacag 360
Query: 1682 agacagagccataacatccacggactggctctctaaactggacagtaaatataggaaaaa 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agacagagccataacatccacggactggctctctaaactggacagtaaatataggaaaaa 420
Query: 1742 gaggcaggagacacaggagaagctgaaagatgcacggcgggagtcagatataatatctaa 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaggcaggagacacaggagaagctgaaagatgcacggcgggagtcagatataatatctaa 480
Query: 1802 agttaactatgaacaaaaattagcacatctggagcacaagctcaagtatgagttgagcat 1861
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggttaactatgaacaaaaattagcacatctggagcacaagctcaagtatgagttgagcat 540
Query: 1862 accggagagtctcatagaggaggtccagcccactgtggagttaccacctctgacgccaga 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 accggagagtctcatagaggaggtccagcccactgtggagttaccacctctgacgccaga 600
Query: 1922 acaagagaaactagtcaacagagctctgggacctggaccacctgggcagttgctggtaga 1981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acaagagaaactagtcaacagagctctgggacctggaccacctgggcagttgctggtaga 660
Query: 1982 gaaatttaacttaaggatacacaggcgggatctccaaactctggcgggtttgaattggct 2041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaaatttaacttaaggatacacaggcgggatctccaaactctggcgggtttgaattggct 720
Query: 2042 caacgacgaggtgatcaatttctacatgaacctgctgatgcagaggagcgaggagcgcaa 2101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caacgacgaggtgatcaatttctacatgaacctgctgatgcagaggagcgaggagcgcaa 780
Query: 2102 ggagctgccgcgggtgtacgccaccaacaccttcttctaccctaagctgatgcagagcgg 2161
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 781 ggagctgccgcgggtgtacgccaccaacaccttcttctacccgaagctgatgcagagcgg 840
Query: 2162 ccaggcgggcctcaggaggtggacgaggaaggtggacatcttcggccacgacttgatggt 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ccaggcgggcctcaggaggtggacgaggaaggtggacatcttcggccacgacttgatggt 900
Query: 2222 ggtcccggtccaccttggcgtccactggtgcctcagtctcatcgacttccgggagaagaa 2281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ggtcccggtccaccttggcgtccactggtgcctcagtctcatcgacttccgggagaagaa 960
Query: 2282 gatctcgtacctggacagcatgggcgcgagaaacgagccgtgcctcgccgcgctcctaca 2341
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 961 gatctcgtacctggacagcatgggcgcgatgaacgagccgtgcctcgccgcgctcctaca 1020
Query: 2342 gtacctgagggacgagcaccaggacaagaagggacaggccttcgacgacgcgggctggaa 2401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gtacctgagggacgagcaccaggacaagaagggacaggccttcgacgacgcgggctggaa 1080
Query: 2402 gacggagaacatgaaggacat-cccccagcagatgaacggcagcgactgcggcatgttcg 2460
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gacggagaacatgaaggacatccccccagcagatgaacggcagcgactgcggcatgttcg 1140
Query: 2461 cgtgcacgttcgccgagttcagctcgcgaggggcgcggtacaccttcagccaggcgcaca 2520
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cgtgcacgttcgcngnnntcagctcgcgaggggcgcggtacaccttcagccaggcgcaca 1200
Query: 2521 tgccctacctgc 2532
||||||||||||
Sbjct: 1201 tgccctacctgc 1212
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 320,122
Number of extensions: 5986
Number of successful extensions: 5986
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5983
Number of HSP's successfully gapped: 1
Length of query: 3079
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3061
Effective length of database: 8,109,745
Effective search space: 24823929445
Effective search space used: 24823929445
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)