BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02148 (UTR included)
(781 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 90 6e-18
BF14_335_C2 74 4e-13
BF14_335_C4 68 2e-11
>BF01019A1H08
Length = 504
Score = 89.7 bits (45), Expect = 6e-18
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 553 cccaggcactgttgaagttcctctcactgcaacgcgatggacccggtacccgcccgttga 612
||||||||||||||||| ||||||| |||||||||||||||||||| |||||| || |||
Sbjct: 452 cccaggcactgttgaagctcctctccctgcaacgcgatggacccggcacccgcacggtga 393
Query: 613 atcca 617
|||||
Sbjct: 392 atcca 388
>BF14_335_C2
Length = 1827
Score = 73.8 bits (37), Expect = 4e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 553 cccaggcactgttgaagttcctctcactgcaacgcgatggacccggtacccgcccgttga 612
||||||||||||||||| ||||||| |||||||||| |||||||| |||||| || |||
Sbjct: 896 cccaggcactgttgaagctcctctccctgcaacgcggcggacccggcacccgcacggtga 837
Query: 613 atcca 617
|||||
Sbjct: 836 atcca 832
>BF14_335_C4
Length = 1491
Score = 67.9 bits (34), Expect = 2e-11
Identities = 74/86 (86%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 543 ggtcacaagccccaggcactgttgaagttcctctcactgcaacgcgatggacccggtacc 602
|||| |||| ||||||||||||||||| ||||||| |||||||||||||| ||| | | |
Sbjct: 1267 ggtcgcaagtcccaggcactgttgaagctcctctc-ctgcaacgcgatggtccccgcaac 1325
Query: 603 cgcccgttgaatccaaggaatactga 628
||| || |||||||| ||||| ||||
Sbjct: 1326 cgcacggtgaatccatggaatgctga 1351
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 163,141
Number of extensions: 4567
Number of successful extensions: 4567
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4566
Number of HSP's successfully gapped: 3
Length of query: 781
Length of database: 8,280,457
Length adjustment: 16
Effective length of query: 765
Effective length of database: 8,128,713
Effective search space: 6218465445
Effective search space used: 6218465445
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)