BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02179 (UTR included)
(1540 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 161 4e-39
BF01043B1E03 135 2e-31
BF01031B2E06 96 2e-19
BF01017A1F03 80 1e-14
BF01016B1E06 72 3e-12
BF14_2249_C1 70 1e-11
BF14_335_C4 70 1e-11
>BF14_335_C2
Length = 1827
Score = 161 bits (81), Expect = 4e-39
Identities = 277/343 (80%), Gaps = 22/343 (6%)
Strand = Plus / Minus
Query: 574 acatatttatgtattcgcgaattttaaagcgcgttgtggtgatagagcttacggtttctt 633
|||||||| |||||||||||||||||||||||| | | | ||||||| ||||||| |||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 634 gggaaaccaatatccccaaagaccataccatcaaggtcaacaaatattacgagctcacaa 693
|| | ||||| ||||||||| ||||| |||||||||||||||| ||||| |||
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgag------- 1165
Query: 694 acgagctcactcgaaataggttcatcgtgga-tttatacgcggcagaagtgggagcgagt 752
|||||| | ||||||||| | | | ||| |||| || ||||||||||| |||
Sbjct: 1164 -----ctcactaggaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagt 1110
Query: 753 t------gtataacggctaaatctctctacatcctacttaaagacttgggcctgtccaga 806
||||||| |||||||||||||||| |||||| ||| |||||||||||||||||
Sbjct: 1109 gagagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccaga 1050
Query: 807 actcacatcaattcattcttagaacatacttcgaaggcagccctagtaggttcttttcaa 866
||| ||| || ||||||||| |||| |||||||||| |||| ||||||||||| ||||||
Sbjct: 1049 actaacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaa 990
Query: 867 atttggttaggtagagagatgagcatggacagtggagatgagc 909
|||||||||| |||||| |||| ||||| |||||| |||||
Sbjct: 989 atttggttag---gagagaggagcttggacggtggaggtgagc 950
>BF01043B1E03
Length = 830
Score = 135 bits (68), Expect = 2e-31
Identities = 145/170 (85%), Gaps = 3/170 (1%)
Strand = Plus / Plus
Query: 754 gtataacggctaaatctctctacatcctacttaaagacttgggcctgtccagaactcaca 813
||||||| ||| ||||||||||| |||||| ||| ||||| ||||| |||||||| |||
Sbjct: 216 gtataacagcttcatctctctacaacctactgaaacacttgagcctgcccagaactaaca 275
Query: 814 tcaattcattcttagaacatacttcgaaggcagccctagtaggttcttttcaaatttggt 873
|||| |||||||| |||| |||| | ||||||| ||||| ||| |||||||||||||
Sbjct: 276 tcaaatcattcttggaacgtactgcaaaggcaggcctag---gtttgtttcaaatttggt 332
Query: 874 taggtagagagatgagcatggacagtggagatgagcatttaacgcgcgtt 923
|||||||||||| || | |||||||||||| |||||| ||||||||||||
Sbjct: 333 taggtagagagaggaccttggacagtggaggtgagcacttaacgcgcgtt 382
>BF01031B2E06
Length = 707
Score = 95.6 bits (48), Expect = 2e-19
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 724 atttatacgcggcagaagtgggagcgagttgtataacggctaaatctctctacatcctac 783
|||| ||||||| ||||||||||||||| | ||| |||||||||||| ||| |||||
Sbjct: 513 atttgtacgcggtagaagtgggagcgagcgttgtaaaagctaaatctctccacaacctac 572
Query: 784 ttaaagacttgggcctgtccagaactcacatcaattcattcttagaacatacttcgaagg 843
| ||| |||||||||||||||| || ||||||| | || |||||||||||||||||||
Sbjct: 573 taaaaaccttgggcctgtccagatctaacatcaaataatctttagaacatacttcgaagg 632
Query: 844 cagc 847
||||
Sbjct: 633 cagc 636
>BF01017A1F03
Length = 782
Score = 79.8 bits (40), Expect = 1e-14
Identities = 112/135 (82%), Gaps = 2/135 (1%)
Strand = Plus / Plus
Query: 788 agacttgggcctgtccagaactcacatcaattcattcttagaacatacttcgaag--gca 845
||||||| ||| ||||| |||| |||||||||||||||| |||| |||||| ||| |||
Sbjct: 116 agacttgagccagtccaaaactaacatcaattcattcttggaacgtacttccaaggcgca 175
Query: 846 gccctagtaggttcttttcaaatttggttaggtagagagatgagcatggacagtggagat 905
||||||||| || |||| || |||||||| |||||||| |||| | || |||||| |
Sbjct: 176 gccctagtacattagtttctaagttggttagatagagagaggagcttccacggtggaggt 235
Query: 906 gagcatttaacgcgc 920
|||| ||||||||||
Sbjct: 236 gagcgtttaacgcgc 250
>BF01016B1E06
Length = 606
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 860 ttttcaaatttggttaggtagagagatgagcatggacagtggagatgagcatttaacgcg 919
|||||||||||||||||||||||||| ||| ||||| |||||| ||||| |||||||||
Sbjct: 324 ttttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacgcg 265
>BF14_2249_C1
Length = 1315
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 480 ctttcgcaagcattcatttaaatgaaactaatattttcggatt 522
||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 331 ctttcacaagtattcatttaaatgaaactaatattttcggatt 373
>BF14_335_C4
Length = 1491
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 840 aaggcagccctagtaggttcttttcaaatttggttaggtagagagatgagcatggacagt 899
||||||||||||| ||| || |||| ||||||||||||||||||| |||| |||| |||
Sbjct: 1155 aaggcagccctagcaggatcgattcatatttggttaggtagagagaggagcttggaaagt 1214
Query: 900 ggagatgagcatttaacgcgcgt 922
||| ||||| ||||| ||||||
Sbjct: 1215 tgaggtgagcgtttaatgcgcgt 1237
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 178,353
Number of extensions: 3237
Number of successful extensions: 3237
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 3233
Number of HSP's successfully gapped: 8
Length of query: 1540
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1523
Effective length of database: 8,119,229
Effective search space: 12365585767
Effective search space used: 12365585767
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)