BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02186 (UTR included)
(2110 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B1D04 1306 0.0
BF01041B1G09 1019 0.0
BF01039A2F10 874 0.0
BF01031A2B05 96 3e-19
>BF01005B1D04
Length = 683
Score = 1306 bits (659), Expect = 0.0
Identities = 677/683 (99%)
Strand = Plus / Plus
Query: 432 aaggattttacataaattggaagctaaaaaaaaggaataagcaccatctcgaatcattgt 491
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 1 aaggattttacataaattggaagctaaaaaaaagaaataagcaccatctccaatcattgt 60
Query: 492 tcaaataaaatggctaatcctaagtacgaaaatcttcccggcatagcctatgaccaaccc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaaataaaatggctaatcctaagtacgaaaatcttcccggcatagcctatgaccaaccc 120
Query: 552 gatgtatatgaaaccgatgatttgccggaggctgaccagccggatccgtatgaagaggaa 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgtatatgaaaccgatgatttgccggaggctgaccagccggatccgtatgaagaggaa 180
Query: 612 gaaaatagctgtattgaacagttacatttatcagtgaaagattctttcaatacattcaaa 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaaatagctgtattgaacagttacatttatcagtgaaagattctttcaatacattcaaa 240
Query: 672 ggaaaatttctaactgggaatgttgatttttctgatagactcagcaggaaaaatcgtatc 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaaaatttctaactgggaatgttgatttttctgatagactcagcaggaaaaatcgtatc 300
Query: 732 ggatacagagctggtgagtgggaattggcagcggagggtgacacagagacaacattggag 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggatacagagctggtgagtgggaattggcagcggagggtgacacagagacaacattggag 360
Query: 792 cgctacaatagacttcgctgtgagttctcagagctgttggaagaagtcacacagaaagaa 851
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 361 cgctacaatagacttcgctgtgagttctcagagctgttggaggaagtcacacagaaagaa 420
Query: 852 aataaagccatagagatcgaaaaggaggaatacagcaaacttgcagcacagatcaattca 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aataaagccatagagatcgaaaaggaggaatacagcaaacttgcagcacagatcaattca 480
Query: 912 acaaagaaacttctagaagaattaaaactagaagagggggaacaaattgatcccaaggcg 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acaaagaaacttctagaagaattaaaactagaagagggggaacaaattgatcccaaggcg 540
Query: 972 gagaaattgaaggaatacttaagtgtcagtggaaagaaacaaggtgataaggtcacagca 1031
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 541 gagaaattgaaggaatacttaagtgtcagtggaaagaaacaaggtgataaagtcacagca 600
Query: 1032 catttgaaactcaagcctgaagtcaatttagcgcagacggccagaatagcacagttggag 1091
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 601 catttgaaactcaagcctgaagtcaacttagcgcagacagccagaatagcacagttggag 660
Query: 1092 cacagattacataaactggagca 1114
|||||||||||||||||||||||
Sbjct: 661 cacagattacataaactggagca 683
>BF01041B1G09
Length = 756
Score = 1019 bits (514), Expect = 0.0
Identities = 529/535 (98%)
Strand = Plus / Plus
Query: 449 tggaagctaaaaaaaaggaataagcaccatctcgaatcattgttcaaataaaatggctaa 508
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 tggaagctaaaaaaaaggaataagcaccatctnnnatcattgttcaaataaaatggctaa 60
Query: 509 tcctaagtacgaaaatcttcccggcatagcctatgaccaacccgatgtatatgaaaccga 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctaagtacgaaaatcttcccggcatagcctatgaccaacccgatgtatatgaaaccga 120
Query: 569 tgatttgccggaggctgaccagccggatccgtatgaagaggaagaaaatagctgtattga 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatttgccggaggctgaccagccggatccgtatgaagaggaagaaaatagctgtattga 180
Query: 629 acagttacatttatcagtgaaagattctttcaatacattcaaaggaaaatttctaactgg 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acagttacatttatcagtgaaagattctttcaatacattcaaaggaaaatttctaactgg 240
Query: 689 gaatgttgatttttctgatagactcagcaggaaaaatcgtatcggatacagagctggtga 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaatgttgatttttctgatagactcagcaggaaaaatcgtatcggatacagagctggtga 300
Query: 749 gtgggaattggcagcggagggtgacacagagacaacattggagcgctacaatagacttcg 808
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 301 gtgggaattggcagcggagggtgacactgagacaacaatggagcgctacaatagacttcg 360
Query: 809 ctgtgagttctcagagctgttggaagaagtcacacagaaagaaaataaagccatagagat 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgtgagttctcagagctgttggaagaagtcacacagaaagaaaataaagccatagagat 420
Query: 869 cgaaaaggaggaatacagcaaacttgcagcacagatcaattcaacaaagaaacttctaga 928
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaaaaggaggaatacagcaaacttgcagcacagatcaattcaacaaagaaacttctaga 480
Query: 929 agaattaaaactagaagagggggaacaaattgatcccaaggcggagaaattgaag 983
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agaattaaaactagaagagggggaacaaattgatcccaaggcggagaaattgaag 535
>BF01039A2F10
Length = 799
Score = 874 bits (441), Expect = 0.0
Identities = 471/482 (97%)
Strand = Plus / Plus
Query: 395 tggtattggctctgacgtcatctttttggccaaataaaaggattttacataaattggaag 454
|||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||
Sbjct: 1 tggtattggctctgacgtcatctttttgcccannnaaaaggattttacgtaaattggaag 60
Query: 455 ctaaaaaaaaggaataagcaccatctcgaatcattgttcaaataaaatggctaatcctaa 514
||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||
Sbjct: 61 ctaaaaaaaaggaataagcgccttctcgaatcattgttgaaataaaatggctaatcctaa 120
Query: 515 gtacgaaaatcttcccggcatagcctatgaccaacccgatgtatatgaaaccgatgattt 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtacgaaaatcttcccggcatagcctatgaccaacccgatgtatatgaaaccgatgattt 180
Query: 575 gccggaggctgaccagccggatccgtatgaagaggaagaaaatagctgtattgaacagtt 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccggaggctgaccagccggatccgtatgaagaggaagaaaatagctgtattgaacagtt 240
Query: 635 acatttatcagtgaaagattctttcaatacattcaaaggaaaatttctaactgggaatgt 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acatttatcagtgaaagattctttcaatacattcaaaggaaaatttctaactgggaatgt 300
Query: 695 tgatttttctgatagactcagcaggaaaaatcgtatcggatacagagctggtgagtggga 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgatttttctgatagactcagcaggaaaaatcgtatcggatacagagctggtgagtggga 360
Query: 755 attggcagcggagggtgacacagagacaacattggagcgctacaatagacttcgctgtga 814
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 attggcagcggagggtgacactgagacaacaatggagcgctacaatagacttcgctgtga 420
Query: 815 gttctcagagctgttggaagaagtcacacagaaagaaaataaagccatagagatcgaaaa 874
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 421 gttctcagagctgttggaagaagtcacacagaaagaaaataaagccatagagattgaaaa 480
Query: 875 gg 876
||
Sbjct: 481 gg 482
>BF01031A2B05
Length = 617
Score = 95.6 bits (48), Expect = 3e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 1 gatttaaagaaaggttattgaatgataatttcaatataatgtgatgcaagaccaaa 56
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 56 gatttaaagaaaggttattgaaggataatttcaatatgatgtgatgcaagaccaaa 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 298,868
Number of extensions: 6368
Number of successful extensions: 6368
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6368
Number of HSP's successfully gapped: 4
Length of query: 2110
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2093
Effective length of database: 8,119,229
Effective search space: 16993546297
Effective search space used: 16993546297
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)