BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02189 (UTR included)
(2338 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1468_C1 914 0.0
>BF14_1468_C1
Length = 1433
Score = 914 bits (461), Expect = 0.0
Identities = 482/489 (98%)
Strand = Plus / Plus
Query: 1850 atgtaacatatattcatagtatataggactgatgtagagtctatgtatagcgtttgagac 1909
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 atgtaacatatattcatagtatataggactgatgtagagtctatgtatagtgtttgagac 60
Query: 1910 gggtagagtgtacggcgtcgccagtactatgaagctgcggaggcgatcacgtgactgtcg 1969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggtagagtgtacggcgtcgccagtactatgaagctgcggaggcgatcacgtgactgtcg 120
Query: 1970 ttagacggagggattaatgtacatattaatctaacagaggccgcggagagtcgagggcga 2029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttagacggagggattaatgtacatattaatctaacagaggccgcggagagtcgagggcga 180
Query: 2030 tcctcgtctcgtggaccatgtcgatggtatcgttgtatgctgcggtggttcaagttggcg 2089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcctcgtctcgtggaccatgtcgatggtatcgttgtatgctgcggtggttcaagttggcg 240
Query: 2090 ttgtattggaaaagttttatcataaattagtttgtgcgtttattgtatagagaaaagtgc 2149
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 241 ttgtattggaaaagttttatcataaattagtttgtgcgtttattgtatagaaaaaagtgc 300
Query: 2150 gtagacagtgctgtagatgagcatgttgtcatacatcatgacccgaatgattattcaatt 2209
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 301 gtacacagtgctgtagatgagcatgttgtaatacatcatgacccgaatgattattcaatt 360
Query: 2210 ttaatatacgagccgtttatatggcgtgtagtccacgtgctaataatataatgaatttat 2269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 361 ttaatatacgagccgtttatatggcgtgtagtccacgtgctaataatataatgaattaat 420
Query: 2270 atacaggatgtagctaacaaagtagtccagtagtgatgaaatgacggaaggtcgcgtaac 2329
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 421 atacaggatgtagctaacgaagtagtccagtagtgatgaaatgacggtaggtcgcgtaac 480
Query: 2330 tttgatatg 2338
|||||||||
Sbjct: 481 tttgatatg 489
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 221,205
Number of extensions: 4679
Number of successful extensions: 4679
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4679
Number of HSP's successfully gapped: 1
Length of query: 2338
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2321
Effective length of database: 8,119,229
Effective search space: 18844730509
Effective search space used: 18844730509
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)