BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02200 (UTR included)
(2422 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027B1E05 1376 0.0
>BF01027B1E05
Length = 714
Score = 1376 bits (694), Expect = 0.0
Identities = 700/702 (99%)
Strand = Plus / Plus
Query: 408 acagctgtgtttcattttgttagtttcgttagttgctcgtggttatttttatattttgtg 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 acagctgtgtttcattttgttagtttcgttagttgctcgtggttatttttatattttgtg 72
Query: 468 aatattcacagataatttatataaaattgcgtaatggtggaaaaggctgaggtgaagccg 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aatattcacagataatttatataaaattgcgtaatggtggaaaaggctgaggtgaagccg 132
Query: 528 gaatcacttctcaatctagatgatttgttacaatgtccagtgtgctatgaaataccatca 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gaatcacttctcaatctagatgatttgttacaatgtccagtgtgctatgaaataccatca 192
Query: 588 ggacaaatatttcagtgcaatgagggtcatcatgtatgtggacgttgcaagatgcgcctt 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggacaaatatttcagtgcaatgagggtcatcatgtatgtggacgttgcaagatgcgcctt 252
Query: 648 gatgtgtgcccagtatgtcgggcactcttttttggcacaagaaattatgctatggaagaa 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gatgtgtgcccagtatgtcgggcactcttttttggcacaagaaattatgctatggaagaa 312
Query: 708 ttgattgccaattttagaaaattacgtgcttttaaacttggtgctaaacctacaaacggc 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttgattgccaattttagaaaattacgtgcttttaaacttggtgctaaacctacaaacggc 372
Query: 768 tcgggttcttcagaaagcagtacaccagctaaagacacaaccacaggggaatgtgaaaat 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcgggttcttcagaaagcagtacaccagctaaagacacaaccacaggggaatgtgaaaat 432
Query: 828 gatgttaatgaggaagatgaagaaaataatctcaatttacctaatcaagctccactgaga 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gatgttaatgaggaagatgaagaaaataatctcaatttacctaatcaagctccactgaga 492
Query: 888 cctcctccggcatgcaaagggctcttccgttgcctttgttgcaaaagtggacaaggggaa 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cctcctccggcatgcaaagggctcttccgttgcctttgttgcaaaagtggacaaggggaa 552
Query: 948 aggttaccagccgcccgcctattgaaccatctccgttattttcatgctccagatctgctt 1007
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aggttaccagccgcccgcctattgaaccatctccgttattttcatgctccagatctgctc 612
Query: 1008 gagggtcggactgagaatggcgagtatttgcaagcatggcaattttctacagtccctggc 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gagggtcggactgagaatggcgagtatttgcaagcatggcaattttctacagtccctggc 672
Query: 1068 aaacttgttactgccgttagagtagctgatatgggcatattc 1109
||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 673 aaactggttactgccgttagagtagctgatatgggcatattc 714
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 293,313
Number of extensions: 6804
Number of successful extensions: 6804
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6804
Number of HSP's successfully gapped: 1
Length of query: 2422
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2405
Effective length of database: 8,119,229
Effective search space: 19526745745
Effective search space used: 19526745745
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)