BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02206 (UTR included)
(1348 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 155 2e-37
BF14_335_C4 105 2e-22
BF01019A1H08 101 3e-21
BF01043B1E03 90 1e-17
BF01016B1E06 86 2e-16
BF01017A1F03 72 3e-12
>BF14_335_C2
Length = 1827
Score = 155 bits (78), Expect = 2e-37
Identities = 248/301 (82%), Gaps = 9/301 (2%)
Strand = Plus / Minus
Query: 743 gagaggtataacagctaaatcactctacaacctactaaaagatctggacctgtctagaat 802
||||||||||||||||||||| ||||||| |||||||||| | ||| |||||| ||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 803 ctacatcagttcagtttt-gaacgtacttcgaaggcagccccagtagattcgtttcaaat 861
||| ||||||| | || ||||||||||||||| |||| | ||||| ||||||||||||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaat 988
Query: 862 ttggttaggtagagagaggagcttggacggtggcggtgagcatta--aacgcgcgtttga 919
|||||||| |||||||||||||||||||||| ||||||| ||| ||||| ||| ||
Sbjct: 987 ttggttag---gagagaggagcttggacggtggaggtgagcgttatgtacgcgagttaga 931
Query: 920 tacacctggctcttaaatctactcctgggtcgcaagtcccaggaactgttgtaactcccc 979
|| |||||||||| |||| |||| ||||||| ||||||| ||||||| | |||| |
Sbjct: 930 ta---ggggctcttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctc 874
Query: 980 tccttacaacttgatgggcccggcacccgtacggtgattccatggaatgctgagaggttt 1039
||| | |||| | || ||||||||||| ||||||| ||||| ||| ||| ||||||||
Sbjct: 873 tccctgcaacgcggcggacccggcacccgcacggtgaatccatagaaagctaagaggttt 814
Query: 1040 c 1040
|
Sbjct: 813 c 813
Score = 93.7 bits (47), Expect = 7e-19
Identities = 101/119 (84%)
Strand = Plus / Minus
Query: 568 acatatttaggtattcgcgaaaattaaagcgcgttatcctaatagagcttacggttcttt 627
|||||||| ||||||||||| |||||||||| || |||||||||| |||||||| ||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttcctt 1218
Query: 628 gggcaaccaacctccccaaagaccatgccatcaaggtcaaaaaatattacaagctcact 686
|| |||||| |||||||| ||||||||||||||||||| || ||||| ||||||||
Sbjct: 1217 ggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcact 1159
>BF14_335_C4
Length = 1491
Score = 105 bits (53), Expect = 2e-22
Identities = 171/208 (82%), Gaps = 3/208 (1%)
Strand = Plus / Plus
Query: 833 aaggcagccccagtagattcgtttcaaatttggttaggtagagagaggagcttggacggt 892
|||||||||| || || ||| |||| ||||||||||||||||||||||||||||| ||
Sbjct: 1155 aaggcagccctagcaggatcgattcatatttggttaggtagagagaggagcttggaaagt 1214
Query: 893 ggcggtgagcattaaacgcgcgtttgatacacctggctcttaaatctactcctgggtcgc 952
| ||||||| || || |||||| |||| | | | |||||| |||| ||||||||||
Sbjct: 1215 tgaggtgagcgtttaatgcgcgtaagataaag--gccccttaaacctacacctgggtcgc 1272
Query: 953 aagtcccaggaactgttgtaactcccctccttacaacttgatgggcccggcacccgtacg 1012
|||||||||| ||||||| | |||| |||| | |||| ||||| ||| ||| ||| |||
Sbjct: 1273 aagtcccaggcactgttgaagctcctctcc-tgcaacgcgatggtccccgcaaccgcacg 1331
Query: 1013 gtgattccatggaatgctgagaggtttc 1040
|||| |||||||||||||||||| ||||
Sbjct: 1332 gtgaatccatggaatgctgagagttttc 1359
>BF01019A1H08
Length = 504
Score = 101 bits (51), Expect = 3e-21
Identities = 102/119 (85%)
Strand = Plus / Minus
Query: 931 cttaaatctactcctgggtcgcaagtcccaggaactgttgtaactcccctccttacaact 990
|||||| |||| |||||||||||| ||||||| ||||||| | |||| |||| | ||||
Sbjct: 478 cttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaacg 419
Query: 991 tgatgggcccggcacccgtacggtgattccatggaatgctgagaggtttcatatcatct 1049
||||| ||||||||||| ||||||| ||||| ||||||| ||||||||||| ||||||
Sbjct: 418 cgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcatctcatct 360
>BF01043B1E03
Length = 830
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 853 gtttcaaatttggttaggtagagagaggagcttggacggtggcggtgagcattaaacgcg 912
||||||||||||||||||||||||||||| ||||||| |||| |||||||| | ||||||
Sbjct: 319 gtttcaaatttggttaggtagagagaggaccttggacagtggaggtgagcacttaacgcg 378
Query: 913 cgtttgata 921
|||| ||||
Sbjct: 379 cgttagata 387
>BF01016B1E06
Length = 606
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 854 tttcaaatttggttaggtagagagaggagcttggacggtggcggtgagcattaaacgcg 912
||||||||||||||||||||||||||||| ||||||||||| ||||||| || ||||||
Sbjct: 323 tttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacgcg 265
>BF01017A1F03
Length = 782
Score = 71.9 bits (36), Expect = 3e-12
Identities = 81/95 (85%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 821 gaacgtacttcgaaggc--agccccagtagattcgtttcaaatttggttaggtagagaga 878
||||||||||| ||||| ||||| |||| ||| ||||| || |||||||| ||||||||
Sbjct: 156 gaacgtacttccaaggcgcagccctagtacattagtttctaagttggttagatagagaga 215
Query: 879 ggagcttggacggtggcggtgagcattaaacgcgc 913
||||||| ||||||| ||||||| || |||||||
Sbjct: 216 ggagcttccacggtggaggtgagcgtttaacgcgc 250
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 177,923
Number of extensions: 3551
Number of successful extensions: 3551
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 3547
Number of HSP's successfully gapped: 8
Length of query: 1348
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1331
Effective length of database: 8,119,229
Effective search space: 10806693799
Effective search space used: 10806693799
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)