BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02237 (UTR included)
(1729 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2463_C1 1479 0.0
>BF14_2463_C1
Length = 786
Score = 1479 bits (746), Expect = 0.0
Identities = 776/786 (98%)
Strand = Plus / Plus
Query: 329 ttaatatcaatttcatttaaccacatgtcgacgtataattgtttggtgcttctgaattaa 388
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ttaatatcaatttcatttaaccacatgtcgacgtataattgtttgctgcttctgaattaa 60
Query: 389 atgatatttttacagtataaaaccatcttaaattaaactattgcctctataaaataacag 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgatatttttacagtataaaaccatcttaaattaaactattgcctctataaaataacag 120
Query: 449 ttataagtgatttacaaattcttttattcaagtacgtacaaatattgcaactatggcacc 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttataagtgatttacaaattcttttattcaagtacgtacaaatattgcaactatggcacc 180
Query: 509 ttcagtcccagaagtgaactatatgcctaaagatgaccctatcggtatcagagcagtgtt 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcagtcccagaagtgaactatatgcctaaagatgaccctatcggtatcagagcagtgtt 240
Query: 569 actcggacctcccggttctggcaagggcactcaagctccattgctcaagaagaaattctg 628
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 241 actcggacctcccggttctggcaagggcactcaagcgccattgctcaagaagaaattctg 300
Query: 629 tgtatgtcatttgtcgactggggatatgttacgagcggaagtagcatcaggctccgagct 688
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtatgtcatttatcgactggggatatgttacgagcggaagtagcatcaggctccgagct 360
Query: 689 aggtcgtcgactgaagcaagttatggatgaaggaaaactggtgtcggatgaaatggttgt 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aggtcgtcgactgaagcaagttatggatgaaggaaaactggtgtcggatgaaatggttgt 420
Query: 749 tgacatgattgataagaatcttgataaacctgaatgtaagcatggcttcctgttagatgg 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgacatgattgataagaatcttgataaacctgaatgtaagcatggcttcctgttagatgg 480
Query: 809 attccctagaacagtgccacaagctgaaaagcttgatgatctcttggctaaaaggaaatc 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attccctagaacagtgccacaagctgaaaagcttgatgatctcttggctaaaaggaaatc 540
Query: 869 agctctcgattgtgttattgagttcaatattgaagatagcttgctagtccgtagagtcac 928
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agctcttgattgtgttattgagttcaatattgaagatagcttgctagtccgtagagtcac 600
Query: 929 cggacgattaattcatccagcaagtggtcgcagctatcatgaggagttccatcctcctaa 988
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 601 cggacgattaattcatccagcaagtggtcgcagctatcacgaggagttccatcctcctaa 660
Query: 989 gaaagctatgacggatgatgagaccggtgaacctctgatacggaggtcagatgataacgt 1048
|||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 661 gaaagctatgacggatgatgagacaggagaacccctgatacggaggtcagatgataacgt 720
Query: 1049 taaagctttgcagaagagattagctacatatcacaaccaaacggtacctctcattgatta 1108
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 721 taaagccttgcagaagagattagctacatatcacaaccaaacagtacctctcattgatta 780
Query: 1109 ttatat 1114
||||||
Sbjct: 781 ttatat 786
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 259,128
Number of extensions: 5330
Number of successful extensions: 5330
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5330
Number of HSP's successfully gapped: 1
Length of query: 1729
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1712
Effective length of database: 8,119,229
Effective search space: 13900120048
Effective search space used: 13900120048
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)