BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN02239 (UTR included)
(1094 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 581 e-166
BF01055A2E01 139 1e-32
BF14_729_C1 139 1e-32
BF01025A1A12 92 2e-18
BF01049A2D11 90 9e-18
BF14_729_C2 88 3e-17
BF01058B2C06 84 5e-16
BF01062A1H02 78 3e-14
BF01019B1G10 78 3e-14
BF01011A1H06 76 1e-13
BF01012A2C11 70 8e-12
>BF14_729_C3
Length = 2041
Score = 581 bits (293), Expect = e-166
Identities = 595/693 (85%), Gaps = 8/693 (1%)
Strand = Plus / Plus
Query: 29 tgaagccacctacagttgaacgacaaccttcgatattaccatatgtgaagggagttacta 88
|||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 961 tgaagccacccacagttgaacgacaacctgcgatactaccatatgtgaagggagttactg 1020
Query: 89 acaaaataggcaacatctcgaacaaggtttcgatcaagactatatacaaaccacacaaga 148
||| |||||||||||||| ||| |||||||| || || ||||| ||||||||||| ||||
Sbjct: 1021 acagaataggcaacatcttgaagaaggtttccattaaaactatttacaaaccacataaga 1080
Query: 149 aagtgagccaattcttgagacctatcaagagtaccattcctttacaacaagcggttgttt 208
|||||||||||||||||||||| ||||| |||| |||||||||||||||||||| ||| |
Sbjct: 1081 aagtgagccaattcttgagaccaatcaaaagtaacattcctttacaacaagcgggtgtat 1140
Query: 209 acaaactcgattgtgactgtggcttgtcatacattggacagacaaaaaggagcatcggta 268
|||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 1141 acaaactcgactgtgactgtggcttgtcatacattggacagacgaagaggagcatcggta 1200
Query: 269 caagggtgaaagaacatgtctcagtcattaaaaataggcgccagtcgaagtcagcagtgt 328
|||| || || ||||| |||||| ||| ||||| |||||| |||||||||||||||||
Sbjct: 1201 caagagttaaggaacacatctcagacatcaaaaacaggcgcgcgtcgaagtcagcagtgt 1260
Query: 329 ttaaacacacaatggatagttcaagccact---ttcagtttgataaaccacagatcctcg 385
| ||||||||||||| | || |||||| ||| ||||||||||| || |||||||
Sbjct: 1261 gtgaacacacaatggacaaaccaggccactacattcgttttgataaacctcaaatcctcg 1320
Query: 386 ctcgtgacaacaggtacataccgaggttaatccacaaggttattgaaattaaaaaacata 445
|||| || ||| ||| |||||||| ||||| | | ||| |||||||||||||||||||
Sbjct: 1321 ctcgggaagacaagtatataccgagattaattcgcgaggctattgaaattaaaaaacatc 1380
Query: 446 gcgatttcaatagagaagatggctggaatctatccaacacctgggaccccctcct--caa 503
| ||||||||||||||||||||||||||||||| ||||||||||||||| | || ||
Sbjct: 1381 ccaatttcaatagagaagatggctggaatctatcaaacacctgggaccccgttcttaaaa 1440
Query: 504 atataaagtcccatatccgtcaccacaccgcaggagcacgagaga--gtatgggcattct 561
||||||| |||||| |||| |||||||||||||| | | ||| | || | |||||||
Sbjct: 1441 atataaaatcccatgtccgaaaccacaccgcaggacctcaagacaccgtgagcgcattct 1500
Query: 562 gccggcatccagagcagtatgccagaaaattgagaaatcgttagcggtagactataaata 621
||||||||||||||| ||| |||| ||| |||||||| | |||||||| |||||||
Sbjct: 1501 gccggcatccagagcggtacgccannnnattaagaaatcgatggcggtagatgataaata 1560
Query: 622 acaa-gaccaactgattgacattcatatcttttctgcccgtaatcacggttgctacaaag 680
|||| |||||||||| |||||||| | || ||||||||| |||||||||||| |||||
Sbjct: 1561 acaaggaccaactgacagacattcacacctcgtctgcccgtgatcacggttgctgcaaag 1620
Query: 681 taacccaaacgtcgggagtatgtagtttttaaa 713
||||| ||||||||||| |||||||||||||||
Sbjct: 1621 taaccgaaacgtcgggattatgtagtttttaaa 1653
>BF01055A2E01
Length = 412
Score = 139 bits (70), Expect = 1e-32
Identities = 73/74 (98%)
Strand = Plus / Plus
Query: 1012 ctggcaaaaggcagaaagatggtcgcttgactcaagatggattccggatattgatgaaaa 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 ctggcaaaaggcagaaagatggtcgcttgactcaagatggattccggatattgatgaaaa 133
Query: 1072 aataataggtaagt 1085
|||||||| |||||
Sbjct: 134 aataatagataagt 147
>BF14_729_C1
Length = 981
Score = 139 bits (70), Expect = 1e-32
Identities = 125/142 (88%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 77 agggagttactaacaaaataggcaacatctcgaacaaggtttcgatcaagactatataca 136
||||||||||| ||| |||||||||||| | ||| ||| |||| ||||||||||| |||
Sbjct: 142 agggagttactgacagaataggcaacattttgaagaagctttccatcaagactattcaca 83
Query: 137 aaccacacaagaaagtgagccaattcttgagacctatcaagagtaccattcctttacaac 196
||||||| ||||||||||||||||||||||||||||||||||||| |||| | || |||
Sbjct: 82 aaccacataagaaagtgagccaattcttgagacctatcaagagtaacatt-cattggaac 24
Query: 197 aagcggttgtttacaaactcga 218
|||||| ||| |||||||||||
Sbjct: 23 aagcgggtgtatacaaactcga 2
>BF01025A1A12
Length = 880
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 687 aaacgtcgggagtatgtagtttttaaaaattatacaaaacgcgtagaaatccgaaaatat 746
||||||||||||||||||||||||||| || ||| || ||||| || ||||||||||||
Sbjct: 157 aaacgtcgggagtatgtagtttttaaacataataaaatacgcgaagctatccgaaaatat 98
Query: 747 tagtttcatttaaa 760
||||||||||||||
Sbjct: 97 tagtttcatttaaa 84
>BF01049A2D11
Length = 776
Score = 89.7 bits (45), Expect = 9e-18
Identities = 135/163 (82%), Gaps = 4/163 (2%)
Strand = Plus / Plus
Query: 232 ttgtcatacattggacagacaaaaaggagcatcggtacaagggtgaaagaacatgtctca 291
||||||||||||||||||||||| |||||||||| ||||||||| |||||||| |||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 292 gtcatta-aaaataggcgccagtcgaagtcagcagtgtttaaacacacaatggatagttc 350
| || | ||||||| | |||||||||||||| | | ||||||||||||| | |
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 351 aagccact---ttcagtttgataaaccacagatcctcgctcgt 390
| |||||| ||| ||||||||||||||| ||||||||||||
Sbjct: 734 aggccactacattcggtttgataaaccacaaatcctcgctcgt 776
>BF14_729_C2
Length = 1289
Score = 87.7 bits (44), Expect = 3e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 653 tctgcccgtaatcacggttgctacaaagtaacccaaacgtcgggagtatgtagtttttaa 712
||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 533 tctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagtatgtagtttttaa 592
>BF01058B2C06
Length = 772
Score = 83.8 bits (42), Expect = 5e-16
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 653 tctgcccgtaatcacggttgctacaaagtaacccaaacgtcgggagtatgtagtttttaa 712
|||| |||| ||||||| ||| |||||||||| ||||||||||| ||||||||||| |
Sbjct: 477 tctggccgtgatcacggctgcagcaaagtaaccgaaacgtcgggaatatgtagttttaac 418
Query: 713 aaattatacaaaacgcgtagaaatccgaaaatattagtttcattta 758
||| ||| | |||||||| |||| ||||||||||||||||||||
Sbjct: 417 aaaaaataaagcacgcgtagtaatcagaaaatattagtttcattta 372
>BF01062A1H02
Length = 876
Score = 77.8 bits (39), Expect = 3e-14
Identities = 88/103 (85%), Gaps = 1/103 (0%)
Strand = Plus / Plus
Query: 658 ccgtaatcacggttgctacaaagtaacccaaacgtcgggagtatgtagtttttaaaaatt 717
|||| ||| |||||||| | |||||||| |||| ||| ||||||||||||||||||| |
Sbjct: 281 ccgtgatcgcggttgctgcgaagtaaccgaaacttcgtgagtatgtagtttttaaaa-tg 339
Query: 718 atacaaaacgcgtagaaatccgaaaatattagtttcatttaaa 760
|| || |||| | | |||||||||||||||||||||||||||
Sbjct: 340 atgaaatacgctttgtaatccgaaaatattagtttcatttaaa 382
>BF01019B1G10
Length = 488
Score = 77.8 bits (39), Expect = 3e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 640 cattcatatcttttctgcccgtaatcacggttgctacaaagtaacccaaacgtcgggagt 699
||||||||||| ||||||||| ||||||||| || |||| |||| ||||||||||| |
Sbjct: 411 cattcatatctcatctgcccgtgatcacggttactgaaaaggaaccgaaacgtcgggatt 352
Query: 700 atgtagtttttaaaa 714
|||||||||||||||
Sbjct: 351 atgtagtttttaaaa 337
>BF01011A1H06
Length = 739
Score = 75.8 bits (38), Expect = 1e-13
Identities = 78/90 (86%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 618 aataacaag-accaactgattgacattcatatcttttctgcccgtaatcacggttgctac 676
||||||||| ||||||||| |||| ||| |||| ||||||||| ||||||||| ||
Sbjct: 429 aataacaaggaccaactgacagacactcacatctcgtctgcccgtgatcacggttactga 488
Query: 677 aaagtaacccaaacgtcgggagtatgtagt 706
||||||||| ||||||||||||||||||||
Sbjct: 489 aaagtaaccgaaacgtcgggagtatgtagt 518
>BF01012A2C11
Length = 780
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 663 atcacggttgctacaaagtaacccaaacgtcgggagtatgtagtttttaaa 713
|||||||||||| |||||||||| |||||||||||| || |||||||||||
Sbjct: 289 atcacggttgctgcaaagtaaccgaaacgtcgggagcatttagtttttaaa 239
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 133,056
Number of extensions: 2552
Number of successful extensions: 2552
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 2548
Number of HSP's successfully gapped: 13
Length of query: 1094
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1077
Effective length of database: 8,119,229
Effective search space: 8744409633
Effective search space used: 8744409633
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)